EnhancerDB
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  3. rs8048145[chr16:19393400]
Enhancers that have rs8048145[chr16:19393400]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19385025 19410955 enh16592
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs8048145[chr16:19393400]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19392870 19394564 ZNF274 GTRD no Cervix (HeLa-S3) 21695374
chr16 19392985 19394241 TCF7L2 GTRD no Colon (HCT116) 21695375
chr16 19393040 19394351 ZNF143 GTRD no Epithelial (MCF-7) 21695376
chr16 19393046 19394298 ZNF274 GTRD no Cervix (HeLa-S3) 21695377
chr16 19393157 19394250 TCF7L2 GTRD no Colon (HCT116) 21695378
chr16 19393199 19394545 ZNF274 GTRD no Bone Marrow (K562) 21695379
chr16 19393226 19394478 ZNF274 GTRD no Cervix (HeLa-S3) 21695380
chr16 19393231 19394413 ZNF274 GTRD no Cervix (HeLa-S3) 21695381
chr16 19393258 19394332 ZNF274 GTRD no Bone Marrow (K562) 21695382
chr16 19393270 19394104 ZNF274 GTRD no Bone Marrow (K562) 21695383
chr16 19393302 19394194 ZNF274 GTRD no Cervix (HeLa-S3) 21695384
chr16 19393309 19394298 ZNF274 GTRD no Bone Marrow (K562) 21695385
chr16 19393320 19394104 ZNF274 GTRD no Cervix (HeLa-S3) 21695386
chr16 19393341 19394379 TCF7L2 GTRD no Colon (HCT116) 21695387
chr16 19393377 19394237 ZNF274 GTRD no Cervix (HeLa-S3) 21695388
chr16 19393389 19393400 CEBPB JASPAR yes 9864515
chr16 19393390 19394324 TCF7L2 GTRD no Colon (HCT116) 21695389
chr16 19393400 19393404 NFE TRANSFAC yes 9864516
Genes associated with rs8048145[chr16:19393400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 18816175 18937776 - SMG1 ENSG00000157106.12 18937776 455624 Heart 0.0260716 14593