EnhancerDB
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  3. rs8078448[chr17:62680498]
Enhancers that have rs8078448[chr17:62680498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62671385 62687563 enh17299
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs8078448[chr17:62680498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62679248 62683082 ZNF143 GTRD no Epithelial (MCF-7) 21778916
chr17 62679284 62681253 TCF7L2 GTRD no Colon (HCT116) 21778917
chr17 62679301 62682615 ZNF143 GTRD no Epithelial (MCF-7) 21778918
chr17 62679385 62681238 TCF7L2 GTRD no Colon (HCT116) 21778919
chr17 62679402 62682688 ZNF143 GTRD no Epithelial (MCF-7) 21778920
chr17 62679427 62680673 TCF7L2 GTRD no Colon (HCT116) 21778922
chr17 62679445 62681322 TCF7L2 GTRD no Colon (HCT116) 21778923
chr17 62679486 62681239 TCF7L2 GTRD no Colon (HCT116) 21778924
chr17 62679488 62681335 ZNF143 GTRD no Epithelial (MCF-7) 21778925
chr17 62679584 62681248 TCF7L2 GTRD no Colon (HCT116) 21778926
chr17 62679596 62681309 TCF7L2 GTRD no Colon (HCT116) 21778927
chr17 62679606 62681267 TCF7L2 GTRD no Colon (HCT116) 21778928
chr17 62679929 62681391 ZNF274 GTRD no Cervix (HeLa-S3) 21778930
chr17 62680155 62681195 ZNF274 GTRD no Cervix (HeLa-S3) 21778931
chr17 62680238 62681285 ZNF274 GTRD no Cervix (HeLa-S3) 21778932
chr17 62680355 62681115 P63 GTRD no Skin (Keratinocyte) 21778933
chr17 62680452 62681297 ZNF274 GTRD no Cervix (HeLa-S3) 21778934
chr17 62680483 62680501 ESR2 JASPAR yes 55311274
chr17 62680483 62680503 PPARG JASPAR yes 55311275
chr17 62680489 62680508 CTCF JASPAR yes 55311276
chr17 62680493 62680504 YY2 JASPAR yes 55311277
chr17 62680493 62681132 ZNF274 GTRD no Cervix (HeLa-S3) 21778935
chr17 62680494 62680510 NFYA JASPAR yes 55311278
chr17 62680497 62680512 NFYB JASPAR yes 55311279
Genes associated with rs8078448[chr17:62680498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More