EnhancerDB
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Enhancers that have rs850602[chr1:116920952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116912865 116924675 enh582
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
chr1 116920378 116921129 vista3053
VISTA
Transcript factors that have rs850602[chr1:116920952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116918155 116921194 ZNF143 GTRD no Epithelial (MCF-7) 107824056
chr1 116918155 116921194 ZNF143 GTRD no Epithelial (MCF-7) 107824057
chr1 116918155 116921194 ZNF143 GTRD no Epithelial (MCF-7) 107824058
chr1 116920024 116920999 POLR2A UCSC Txn Factor no Conserved 107824154
chr1 116920347 116921031 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332373
chr1 116920347 116921031 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824166
chr1 116920373 116921023 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332374
chr1 116920373 116921023 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824167
chr1 116920378 116920974 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332376
chr1 116920378 116920974 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824169
chr1 116920468 116921128 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332384
chr1 116920468 116921128 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824182
chr1 116920555 116921142 STAT3 UCSC Txn Factor no Conserved 107824206
chr1 116920598 116921034 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332408
chr1 116920598 116921034 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824216
chr1 116920623 116921003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332412
chr1 116920623 116921003 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824220
chr1 116920732 116921142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332417
chr1 116920732 116921142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824226
chr1 116920772 116921176 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332418
chr1 116920772 116921176 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824227
chr1 116920785 116921115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332419
chr1 116920785 116921115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824228
chr1 116920787 116921117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332420
chr1 116920787 116921117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824229
chr1 116920792 116921188 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332421
chr1 116920792 116921188 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824230
chr1 116920814 116921138 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107824231
chr1 116920818 116921094 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332422
chr1 116920818 116921094 USF2 UCSC Txn Factor no Conserved 107824232
chr1 116920818 116921094 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824233
chr1 116920855 116921119 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107824234
chr1 116920866 116921302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332423
chr1 116920866 116921302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824235
chr1 116920879 116921066 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332424
chr1 116920879 116921066 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824236
chr1 116920890 116921270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332425
chr1 116920890 116921270 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824237
chr1 116920912 116921041 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21332426
chr1 116920912 116921041 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107824238
chr1 116920920 116921320 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21332427
chr1 116920920 116921320 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824239
chr1 116920951 116920964 JUN JASPAR yes 31802413
chr1 116920951 116920964 JUN JASPAR yes 118356600
chr1 116920952 116920965 ATF4 JASPAR yes 31802414
chr1 116920952 116920965 ATF4 JASPAR yes 118356601
Genes associated with rs850602[chr1:116920952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More