EnhancerDB
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  3. rs871252[chr1:42144419]
Enhancers that have rs871252[chr1:42144419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs871252[chr1:42144419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42144407 42144422 TFAP2A JASPAR yes 28409119
chr1 42144407 42144422 TFAP2C JASPAR yes 28409120
chr1 42144410 42144421 EBF1 JASPAR yes 28409122
chr1 42144412 42144421 TFAP2A JASPAR yes 28409124
Genes associated with rs871252[chr1:42144419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More