EnhancerDB
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  3. rs879627[chr16:88522541]
Enhancers that have rs879627[chr16:88522541]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88521345 88553535 enh4185
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Thymus Heart
Transcript factors that have rs879627[chr16:88522541]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88521059 88523088 ZNF143 GTRD no Epithelial (MCF-7) 21736451
chr16 88521059 88523088 ZNF143 GTRD no Epithelial (MCF-7) 108222228
chr16 88521080 88523106 ZNF143 GTRD no Epithelial (MCF-7) 21736454
chr16 88521080 88523106 ZNF143 GTRD no Epithelial (MCF-7) 108222232
chr16 88521139 88523177 TCF7L2 GTRD no Colon (HCT116) 21736457
chr16 88521139 88523177 TCF7L2 GTRD no Colon (HCT116) 108222236
chr16 88521149 88529068 TCF7L2 GTRD no Colon (HCT116) 21736458
chr16 88521149 88529068 TCF7L2 GTRD no Colon (HCT116) 108222237
chr16 88521323 88522606 GATA3 UCSC Txn Factor no Conserved 108222244
chr16 88522533 88522545 E2F8 JASPAR yes 12285939
chr16 88522537 88522543 MZF1 JASPAR yes 12285940
Genes associated with rs879627[chr16:88522541], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More