EnhancerDB
  1. Home
  2. SNP
  3. rs893930[chr1:42214652]
Enhancers that have rs893930[chr1:42214652]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs893930[chr1:42214652]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42214644 42214656 HES7 JASPAR yes 28417087
chr1 42214644 42214656 PKNOX1 JASPAR yes 28417088
chr1 42214644 42214656 PKNOX2 JASPAR yes 28417089
chr1 42214644 42214656 TGIF1 JASPAR yes 28417090
chr1 42214644 42214656 TGIF2 JASPAR yes 28417091
chr1 42214645 42214654 SNAI2 JASPAR yes 28417092
chr1 42214645 42214655 HEY2 JASPAR yes 28417093
chr1 42214645 42214655 ID4 JASPAR yes 28417094
chr1 42214645 42214655 TCF4 JASPAR yes 28417095
Genes associated with rs893930[chr1:42214652], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More