EnhancerDB
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  3. rs972099[chr1:172936702]
Enhancers that have rs972099[chr1:172936702]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs972099[chr1:172936702]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172936681 172936702 IRF1 JASPAR yes 33172809
chr1 172936687 172936708 ZNF263 JASPAR yes 33172812
chr1 172936693 172936708 FOXP1 JASPAR yes 33172814
chr1 172936694 172936705 FOXP2 JASPAR yes 33172815
chr1 172936694 172936706 FOXC2 JASPAR yes 33172816
chr1 172936694 172936708 FOXF2 JASPAR yes 33172817
chr1 172936695 172936703 FOXG1 JASPAR yes 33172818
chr1 172936695 172936703 FOXO3 JASPAR yes 33172819
chr1 172936700 172936705 GATA2 JASPAR yes 33172820
Genes associated with rs972099[chr1:172936702], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More