EnhancerDB
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  3. rs9787270[chr1:200264671]
Enhancers that have rs9787270[chr1:200264671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs9787270[chr1:200264671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200264473 200266432 ZNF143 GTRD no Epithelial (MCF-7) 21362880
chr1 200264573 200265550 ZNF143 GTRD no Epithelial (MCF-7) 21362881
chr1 200264573 200265734 ZNF143 GTRD no Epithelial (MCF-7) 21362882
chr1 200264614 200265612 ZNF143 GTRD no Epithelial (MCF-7) 21362883
chr1 200264616 200266014 ZNF143 GTRD no Epithelial (MCF-7) 21362884
chr1 200264625 200265421 ZNF143 GTRD no Epithelial (MCF-7) 21362885
chr1 200264657 200264671 JUN JASPAR yes 34430745
chr1 200264660 200264671 FOSL2 JASPAR yes 34430746
chr1 200264660 200264671 JUNB JASPAR yes 34430747
chr1 200264661 200264672 FOS JASPAR yes 34430748
chr1 200264661 200264672 JUND JASPAR yes 34430749
chr1 200264661 200264672 NFE2 JASPAR yes 34430750
chr1 200264667 200264679 FOXI1 JASPAR yes 34430751
chr1 200264668 200264682 FOXF2 JASPAR yes 34430752
chr1 200264669 200264677 FOXG1 JASPAR yes 34430753
chr1 200264670 200264685 HNF1A JASPAR yes 34430754
chr1 200264670 200264685 MEF2A JASPAR yes 34430755
chr1 200264671 200264683 HNF1B JASPAR yes 34430756
chr1 200264671 200264684 HNF1B JASPAR yes 34430757
Genes associated with rs9787270[chr1:200264671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More