EnhancerDB
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  3. rs9890574[chr17:38272327]
Enhancers that have rs9890574[chr17:38272327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38259185 38273195 enh4407
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs9890574[chr17:38272327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38272223 38272550 TCF7L2 GTRD no Colon (HCT116) 21753489
chr17 38272318 38272332 SPI1 JASPAR yes 54194674
chr17 38272318 38272332 SPIC JASPAR yes 54194675
chr17 38272325 38272329 YY1 TRANSFAC yes 54194676
chr17 38272327 38272342 MEF2C JASPAR yes 54194677
Genes associated with rs9890574[chr17:38272327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More