EnhancerDB
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  3. rs9908052[chr17:77898953]
Enhancers that have rs9908052[chr17:77898953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77874365 77906030 enh17425
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Brain (SK-N-MC) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Heart
Transcript factors that have rs9908052[chr17:77898953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77898350 77900343 TCF7L2 GTRD no Colon (HCT116) 21796705
chr17 77898587 77900114 TCF7L2 GTRD no Colon (HCT116) 21796706
chr17 77898661 77898986 ZNF143 GTRD no Epithelial (MCF-7) 21796707
chr17 77898730 77899187 ZNF274 GTRD no Blood (GM12878) 21796708
chr17 77898739 77899407 TCF7L2 GTRD no Colon (HCT116) 21796709
chr17 77898868 77899285 ZNF274 GTRD no Blood (GM12878) 21796710
chr17 77898949 77898953 NFE TRANSFAC yes 56229632
Genes associated with rs9908052[chr17:77898953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More