EnhancerDB
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  3. rs9912509[chr17:73546835]
Enhancers that have rs9912509[chr17:73546835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 73541846 73552035 enh17378
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Stomach Placenta Colon (HCT116) Thyroid Pancreas Epithelial (MCF-7)
Transcript factors that have rs9912509[chr17:73546835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 73544628 73547339 TCF7L2 GTRD no Colon (HCT116) 21787993
chr17 73544628 73547339 TCF7L2 GTRD no Colon (HCT116) 108294350
chr17 73544628 73547339 TCF7L2 GTRD no Colon (HCT116) 108294351
chr17 73545580 73547600 P63 GTRD no Skin (Keratinocyte) 108294395
chr17 73545580 73547600 P63 GTRD no Skin (Keratinocyte) 108294396
chr17 73545626 73547303 TCF7L2 GTRD no Colon (HCT116) 21788022
chr17 73545626 73547303 TCF7L2 GTRD no Colon (HCT116) 108294402
chr17 73545626 73547303 TCF7L2 GTRD no Colon (HCT116) 108294403
chr17 73545673 73547555 P63 GTRD no Skin (Keratinocyte) 108294408
chr17 73545673 73547555 P63 GTRD no Skin (Keratinocyte) 108294409
chr17 73545774 73547426 P63 GTRD no Skin (Keratinocyte) 108294416
chr17 73546067 73547336 TCF7L2 GTRD no Colon (HCT116) 21788031
chr17 73546067 73547336 TCF7L2 GTRD no Colon (HCT116) 108294422
chr17 73546834 73546853 PAX5 JASPAR yes 55962789
Genes associated with rs9912509[chr17:73546835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 73747675 73761792 - GALK1 ENSG00000108479.7 73761792 200840 Stomach 0.275909 16259