-
Home
- SNP
- rs998459[chr1:156864616]
Enhancers that have rs998459[chr1:156864616]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
156860185 |
156870715 |
enh12303 |
|
|
Transcript factors that have rs998459[chr1:156864616]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
156863279
|
156865378
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107837692
|
|
|
chr1
|
156863402
|
156864758
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107837693
|
|
|
chr1
|
156863859
|
156865271
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107837694
|
|
|
chr1
|
156864104
|
156865441
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107837695
|
|
|
chr1
|
156864106
|
156865518
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107837696
|
|
|
chr1
|
156864243
|
156865155
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107837697
|
|
|
chr1
|
156864297
|
156865235
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107837698
|
|
|
chr1
|
156864434
|
156864718
|
NR3C1
|
UCSC Txn Factor
|
no
|
Conserved
|
107837699
|
|
|
chr1
|
156864434
|
156864718
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
107837700
|
|
|
chr1
|
156864446
|
156864726
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
107837701
|
|
|
chr1
|
156864453
|
156865233
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107837702
|
|
|
chr1
|
156864533
|
156867142
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107837703
|
|
|
chr1
|
156864536
|
156865250
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107837704
|
|
|
chr1
|
156864550
|
156865396
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
21343393
|
|
|
chr1
|
156864550
|
156865396
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107837705
|
|
|
chr1
|
156864565
|
156865288
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107837706
|
|
|
chr1
|
156864592
|
156865335
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107837707
|
|
|
chr1
|
156864601
|
156865475
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107837708
|
|
|
chr1
|
156864603
|
156864620
|
RARA
|
JASPAR
|
yes
|
|
32405730
|
|
|
chr1
|
156864606
|
156865293
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107837709
|
|
|
chr1
|
156864609
|
156864929
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107837710
|
|
|
chr1
|
156864609
|
156865165
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107837711
|
|
|
chr1
|
156864615
|
156865263
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107837712
|
|
Genes associated with rs998459[chr1:156864616], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
156890442
|
156902886
|
+
|
LRRC71
|
ENSG00000160838.9
|
156890442
|
25826
|
Esophagus
|
0.265488
|
1387
|
|