EnhancerDB
  1. Home
  2. Gene
  3. LHX5[ENSG00000089116.3]
Enhancers that regulate LHX5[ENSG00000089116.3]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 113842225 113847955 enh101332 113910085 62130
Thyroid
chr12 113851482 113851626 vista14954 113910085 58459
VISTA
chr12 113855961 113856499 vista14955 113910085 53586
VISTA
chr12 113858388 113858513 vista14956 113910085 51572
VISTA
chr12 113903072 113903274 vista14957 113910085 6811
VISTA
chr12 113908135 113908376 vista14958 113910085 1709
VISTA
chr12 113910690 113910929 vista14959 113910085 605
VISTA
chr12 113911337 113912000 vista14960 113910085 1252
VISTA
chr12 113925032 113925100 vista14961 113910085 14947
VISTA
chr12 113938595 113938989 vista14962 113910085 28510
VISTA
chr12 113951456 113951772 vista14963 113910085 41371
VISTA
chr12 113963765 113967915 enh90977 113910085 53680
Bone Marrow (K562)
chr12 113991125 113995275 enh108549 113910085 81040
Lung (PC-9)
Transcript facotrs that regulate LHX5[ENSG00000089116.3]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 113900584 113907129 EZH2 UCSC Txn Factor no Conserved 113910085 2956 108060498
chr12 113907735 113908166 ZNF143 GTRD no Epithelial (MCF-7) 113910085 1919 108060531
chr12 113908141 113908146 GATA2 JASPAR yes 113910085 1939 82480143
chr12 113908151 113908161 EN2 JASPAR yes 113910085 1924 82480144
chr12 113908151 113908161 GBX1 JASPAR yes 113910085 1924 82480145
chr12 113908152 113908160 BSX JASPAR yes 113910085 1925 82480146
chr12 113908152 113908160 DLX6 JASPAR yes 113910085 1925 82480147
chr12 113908152 113908160 MSX1 JASPAR yes 113910085 1925 82480148
chr12 113908152 113908160 MSX2 JASPAR yes 113910085 1925 82480149
chr12 113908159 113908169 BHLHE22 JASPAR yes 113910085 1916 82480150
chr12 113908159 113908169 NEUROD2 JASPAR yes 113910085 1916 82480151
chr12 113908169 113908177 GATA5 JASPAR yes 113910085 1908 82480152
chr12 113908175 113908189 ONECUT3 JASPAR yes 113910085 1896 82480153
chr12 113908182 113908186 YY1 TRANSFAC yes 113910085 1899 82480154
chr12 113908189 113908513 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113910085 1572 108060532
chr12 113908201 113908212 DMRT3 JASPAR yes 113910085 1873 82480155
chr12 113908208 113908212 YY1 TRANSFAC yes 113910085 1873 82480156
chr12 113908214 113908218 LFA1 TRANSFAC yes 113910085 1867 82480157
chr12 113908230 113908234 H4TF2 TRANSFAC yes 113910085 1851 82480158
chr12 113908242 113908245 MYB TRANSFAC yes 113910085 1840 82480159
chr12 113908242 113908252 MAX JASPAR yes 113910085 1833 82480160
chr12 113908243 113908253 CLOCK JASPAR yes 113910085 1832 82480161
chr12 113908243 113908253 FIGLA JASPAR yes 113910085 1832 82480162
chr12 113908243 113908253 MAX JASPAR yes 113910085 1832 82480163
chr12 113908243 113908253 MLXIPL JASPAR yes 113910085 1832 82480164
chr12 113908243 113908253 MNT JASPAR yes 113910085 1832 82480165
chr12 113908245 113908250 MYC TRANSFAC yes 113910085 1835 82480166
chr12 113908245 113908250 USF1 TRANSFAC yes 113910085 1835 82480167
chr12 113908245 113908250 USF2 TRANSFAC yes 113910085 1835 82480168
chr12 113908266 113908270 YY1 TRANSFAC yes 113910085 1815 82480169
chr12 113908269 113909781 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113910085 304 108060533
chr12 113908303 113908308 SP1 TRANSFAC yes 113910085 1777 82480170
chr12 113908303 113908310 SP1 TRANSFAC yes 113910085 1775 82480171
chr12 113908320 113908335 RUNX2 JASPAR yes 113910085 1750 82480172
chr12 113908327 113908337 SREBF1 JASPAR yes 113910085 1748 82480173
chr12 113908327 113908337 SREBF2 JASPAR yes 113910085 1748 82480174
chr12 113908339 113908344 SP1 TRANSFAC yes 113910085 1741 82480175
chr12 113908344 113908356 TEAD1 JASPAR yes 113910085 1729 82480176
chr12 113908352 113908361 TFAP4 TRANSFAC yes 113910085 1724 82480177
chr12 113908358 113908371 NFKB1 JASPAR yes 113910085 1714 82480178
chr12 113908358 113908371 NFKB2 JASPAR yes 113910085 1714 82480179
chr12 113908359 113908369 NFKB1 JASPAR yes 113910085 1716 82480180
chr12 113908359 113908369 RELA JASPAR yes 113910085 1716 82480181
chr12 113908359 113908369 REL JASPAR yes 113910085 1716 82480182
chr12 113908359 113908370 NFKB1 JASPAR yes 113910085 1715 82480183
chr12 113908360 113908370 NFKB1 JASPAR yes 113910085 1715 82480184
chr12 113910233 113910833 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113910085 148 108060534
chr12 113910415 113910725 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113910085 330 108060535
chr12 113910675 113910999 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113910085 590 108060536
chr12 113910691 113910706 PRDM1 JASPAR yes 113910085 606 82480185
chr12 113910701 113910721 RREB1 JASPAR yes 113910085 616 82480186
chr12 113910708 113910722 PLAG1 JASPAR yes 113910085 623 82480187
chr12 113910709 113911178 ZNF274 GTRD no Bone Marrow (K562) 113910085 624 108060537
chr12 113910712 113910724 INSM1 JASPAR yes 113910085 627 82480188
chr12 113910715 113910730 NR2C2 JASPAR yes 113910085 630 82480189
chr12 113910717 113910726 SP1 TRANSFAC yes 113910085 632 82480190
chr12 113910717 113910727 SP1 JASPAR yes 113910085 632 82480191
chr12 113910718 113910728 SP1 JASPAR yes 113910085 633 82480192
chr12 113910719 113910725 MAZ TRANSFAC yes 113910085 634 82480193
chr12 113910719 113910729 SP1 JASPAR yes 113910085 634 82480194
chr12 113910720 113910730 MZF1 JASPAR yes 113910085 635 82480195
chr12 113910731 113910751 TBX19 JASPAR yes 113910085 646 82480196
chr12 113910732 113910738 NFIC JASPAR yes 113910085 647 82480197
chr12 113910733 113910749 T JASPAR yes 113910085 648 82480198
chr12 113910734 113910743 SNAI2 JASPAR yes 113910085 649 82480199
chr12 113910734 113910744 ID4 JASPAR yes 113910085 649 82480200
chr12 113910734 113910744 NHLH1 JASPAR yes 113910085 649 82480201
chr12 113910734 113910744 TCF3 JASPAR yes 113910085 649 82480202
chr12 113910734 113910744 TCF4 JASPAR yes 113910085 649 82480203
chr12 113910736 113910745 ZEB1 JASPAR yes 113910085 651 82480204
chr12 113910744 113910764 RREB1 JASPAR yes 113910085 659 82480205
chr12 113910746 113910756 SP1 JASPAR yes 113910085 661 82480206
chr12 113910747 113910754 CEBPA TRANSFAC yes 113910085 662 82480207
chr12 113910747 113910767 RREB1 JASPAR yes 113910085 662 82480208
chr12 113910793 113910807 EBF1 JASPAR yes 113910085 708 82480209
chr12 113910793 113910808 TFAP2A JASPAR yes 113910085 708 82480210
chr12 113910794 113910805 EBF1 JASPAR yes 113910085 709 82480211
chr12 113910795 113910807 TFAP2A JASPAR yes 113910085 710 82480212
chr12 113910795 113910807 TFAP2B JASPAR yes 113910085 710 82480213
chr12 113910795 113910807 TFAP2C JASPAR yes 113910085 710 82480214
chr12 113910795 113910810 TFAP2A JASPAR yes 113910085 710 82480215
chr12 113910795 113910810 TFAP2C JASPAR yes 113910085 710 82480216
chr12 113910796 113910807 EBF1 JASPAR yes 113910085 711 82480217
chr12 113910797 113910806 TFAP2A JASPAR yes 113910085 712 82480218
chr12 113910801 113910806 SP1 TRANSFAC yes 113910085 716 82480219
chr12 113910813 113910824 EBF1 JASPAR yes 113910085 728 82480220
chr12 113910831 113910836 TFAP2A TRANSFAC yes 113910085 746 82480221
chr12 113910831 113910837 MZF1 JASPAR yes 113910085 746 82480222
chr12 113910833 113910838 ETS2 TRANSFAC yes 113910085 748 82480223
chr12 113910847 113910851 LFA1 TRANSFAC yes 113910085 762 82480224
chr12 113910855 113910868 POU2F2 JASPAR yes 113910085 770 82480225
chr12 113910858 113910876 IRF2 JASPAR yes 113910085 773 82480226
chr12 113910863 113910875 IRF1 JASPAR yes 113910085 778 82480227
chr12 113910868 113910883 STAT1 JASPAR yes 113910085 783 82480228
chr12 113910870 113910881 STAT3 JASPAR yes 113910085 785 82480229
chr12 113911058 113911390 ZNF143 GTRD no Epithelial (MCF-7) 113910085 973 108060538
chr12 113911260 113911725 ZNF274 GTRD no Bone Marrow (K562) 113910085 1175 108060539
chr12 113911444 113911455 FOXH1 JASPAR yes 113910085 1359 82480230
chr12 113911448 113911452 YY1 TRANSFAC yes 113910085 1363 82480231
chr12 113911451 113911462 FOXA1 JASPAR yes 113910085 1366 82480232
chr12 113911451 113911466 FOXA1 JASPAR yes 113910085 1366 82480233
chr12 113911458 113911468 MYF6 JASPAR yes 113910085 1373 82480234
chr12 113911468 113911474 TCF4 TRANSFAC yes 113910085 1383 82480235
chr12 113911469 113911481 FOXC2 JASPAR yes 113910085 1384 82480236
chr12 113911469 113911483 FOXF2 JASPAR yes 113910085 1384 82480237
chr12 113911470 113911478 FOXG1 JASPAR yes 113910085 1385 82480238
chr12 113911470 113911478 FOXO3 JASPAR yes 113910085 1385 82480239
chr12 113911486 113911506 RREB1 JASPAR yes 113910085 1401 82480240
chr12 113911506 113911526 RREB1 JASPAR yes 113910085 1421 82480241
chr12 113911508 113911528 RREB1 JASPAR yes 113910085 1423 82480242
chr12 113911510 113911530 RREB1 JASPAR yes 113910085 1425 82480243
chr12 113911528 113911540 FOXI1 JASPAR yes 113910085 1443 82480244
chr12 113911529 113911541 FOXC2 JASPAR yes 113910085 1444 82480245
chr12 113911531 113911542 FOXA1 JASPAR yes 113910085 1446 82480246
chr12 113911534 113911546 FOXI1 JASPAR yes 113910085 1449 82480247
chr12 113911536 113911556 RREB1 JASPAR yes 113910085 1451 82480248
chr12 113911537 113911541 YY1 TRANSFAC yes 113910085 1452 82480249
chr12 113911540 113911552 FOXI1 JASPAR yes 113910085 1455 82480250
chr12 113911553 113912012 ZBTB33 GTRD no Lung (A549) 113910085 1468 108060540
chr12 113911574 113911580 SOX10 JASPAR yes 113910085 1489 82480251
chr12 113911577 113911588 FOXH1 JASPAR yes 113910085 1492 82480252
chr12 113911578 113911584 ZNF354C JASPAR yes 113910085 1493 82480253
chr12 113911608 113911614 ZNF354C JASPAR yes 113910085 1523 82480254
chr12 113911623 113911637 PLAG1 JASPAR yes 113910085 1538 82480255
chr12 113911634 113911643 HIC2 JASPAR yes 113910085 1549 82480256
chr12 113911637 113911647 NKX2-3 JASPAR yes 113910085 1552 82480257
chr12 113911637 113911658 ZNF263 JASPAR yes 113910085 1552 82480258
chr12 113911647 113911657 SP1 JASPAR yes 113910085 1562 82480259
chr12 113911647 113911658 FLI1 JASPAR yes 113910085 1562 82480260
chr12 113911649 113911657 EHF JASPAR yes 113910085 1564 82480261
chr12 113911651 113911658 SPIB JASPAR yes 113910085 1566 82480262
chr12 113911669 113911673 NFE TRANSFAC yes 113910085 1584 82480263
chr12 113911681 113911686 GATA1 TRANSFAC yes 113910085 1596 82480264
chr12 113911694 113911702 NR4A2 JASPAR yes 113910085 1609 82480265
chr12 113911703 113912303 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113910085 1618 108060541
chr12 113911707 113912083 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113910085 1622 108060542
chr12 113911719 113912628 ZNF274 GTRD no Bone Marrow (K562) 113910085 1634 108060543
chr12 113911743 113911754 BATF JASPAR yes 113910085 1658 82480266
chr12 113911745 113911756 FOSL1 JASPAR yes 113910085 1660 82480267
chr12 113911746 113911757 JUNB JASPAR yes 113910085 1661 82480268
chr12 113911767 113911774 NFATC2 JASPAR yes 113910085 1682 82480269
chr12 113911768 113911782 STAT1 JASPAR yes 113910085 1683 82480270
chr12 113911768 113911786 IRF2 JASPAR yes 113910085 1683 82480271
chr12 113911772 113911777 ETS2 TRANSFAC yes 113910085 1687 82480272
chr12 113911782 113911785 MYB TRANSFAC yes 113910085 1697 82480273
chr12 113911788 113911792 LFA1 TRANSFAC yes 113910085 1703 82480274
chr12 113911792 113911806 SPI1 JASPAR yes 113910085 1707 82480275
chr12 113911794 113911812 NFYA JASPAR yes 113910085 1709 82480276
chr12 113911797 113911813 NFYA JASPAR yes 113910085 1712 82480277
chr12 113911800 113911815 NFYB JASPAR yes 113910085 1715 82480278
chr12 113911864 113911867 MYB TRANSFAC yes 113910085 1779 82480279
chr12 113911873 113913239 ZBTB33 GTRD no Lung (A549) 113910085 1788 108060544
chr12 113911877 113912187 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 113910085 1792 108060545
chr12 113911891 113911906 AR JASPAR yes 113910085 1806 82480280
chr12 113911914 113911921 E2F1 TRANSFAC yes 113910085 1829 82480281
chr12 113911942 113913518 ZNF274 GTRD no Bone Marrow (K562) 113910085 1857 108060546
chr12 113911967 113913762 ZBTB33 GTRD no Lung (A549) 113910085 1882 108060547
chr12 113911977 113911996 PAX5 JASPAR yes 113910085 1892 82480282
chr12 113911980 113911989 THAP1 JASPAR yes 113910085 1895 82480283
chr12 113911991 113912389 TCF7L2 GTRD no Colon (HCT116) 113910085 1906 108060548
SNPs associated with LHX5[ENSG00000089116.3], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of LHX5[ENSG00000089116.3]
Back to top
Genomic Location chr12:113899839-113910085[-]
TSS 113910085
Gene Name LHX5
Ensembl ID ENSG00000089116.3
ENTREZID 64211
Uniprot
Q9H2C1
Protein Name
LIM/homeobox protein Lhx5
Expression levels of LHX5[ENSG00000089116.3]
Back to top