EnhancerDB
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Enhancers that regulate EFNB3[ENSG00000108947.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 7512085 7516235 enh102928 7608520 92285
Liver
chr17 7548178 7548354 vista23879 7608520 60166
VISTA
chr17 7554245 7558395 enh99380 7608520 50125
Uterus
chr17 7607455 7607852 vista23880 7608520 668
VISTA
chr17 7615561 7615744 vista23881 7608520 7041
VISTA
chr17 7644985 7656242 enh16960 7608520 36465
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myotube)
chr17 7657457 7657665 vista23882 7608520 48937
VISTA
chr17 7673245 7677395 enh81173 7608520 64725
Prostate (PC-3)
Transcript facotrs that regulate EFNB3[ENSG00000108947.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 7607080 7607600 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 7608520 920 108234714
chr17 7607315 7607729 ZBTB33 GTRD no Lung (A549) 7608520 791 108234715
chr17 7607331 7607652 ZBTB33 GTRD no Lung (A549) 7608520 868 108234716
chr17 7607341 7607652 ZNF274 GTRD no Bone Marrow (K562) 7608520 868 108234717
chr17 7607456 7607475 REST JASPAR yes 7608520 1045 21192053
chr17 7607459 7607463 NFE TRANSFAC yes 7608520 1057 21192054
chr17 7607465 7607475 ZNF740 JASPAR yes 7608520 1045 21192055
chr17 7607467 7607477 SP1 JASPAR yes 7608520 1043 21192056
chr17 7607470 7607475 SP1 TRANSFAC yes 7608520 1045 21192057
chr17 7607488 7607492 YY1 TRANSFAC yes 7608520 1028 21192058
chr17 7607499 7607520 ZNF263 JASPAR yes 7608520 1000 21192059
chr17 7607504 7607515 E2F6 JASPAR yes 7608520 1005 21192060
chr17 7607509 7607530 ZNF263 JASPAR yes 7608520 990 21192061
chr17 7607510 7607520 SP1 JASPAR yes 7608520 1000 21192062
chr17 7607511 7607525 E2F7 JASPAR yes 7608520 995 21192063
chr17 7607512 7607524 E2F8 JASPAR yes 7608520 996 21192064
chr17 7607512 7607532 RREB1 JASPAR yes 7608520 988 21192065
chr17 7607513 7607523 ZNF740 JASPAR yes 7608520 997 21192066
chr17 7607515 7607535 RREB1 JASPAR yes 7608520 985 21192067
chr17 7607532 7607776 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 7608520 744 108234718
chr17 7607565 7607574 THAP1 JASPAR yes 7608520 946 21192068
chr17 7607565 7607584 CTCF JASPAR yes 7608520 936 21192069
chr17 7607566 7607579 TFAP2A JASPAR yes 7608520 941 21192070
chr17 7607604 7607609 ETS2 TRANSFAC yes 7608520 911 21192071
chr17 7607608 7607623 HNF4G JASPAR yes 7608520 897 21192072
chr17 7607622 7607627 TFAP2A TRANSFAC yes 7608520 893 21192073
chr17 7607622 7607628 MZF1 JASPAR yes 7608520 892 21192074
chr17 7607622 7607643 ZNF263 JASPAR yes 7608520 877 21192075
chr17 7607625 7607646 ZNF263 JASPAR yes 7608520 874 21192076
chr17 7607626 7607647 ZNF263 JASPAR yes 7608520 873 21192077
chr17 7607632 7607647 PRDM1 JASPAR yes 7608520 873 21192078
chr17 7607633 7607644 E2F6 JASPAR yes 7608520 876 21192079
chr17 7607639 7607651 TEAD1 JASPAR yes 7608520 869 21192080
chr17 7607640 7607647 SPIB JASPAR yes 7608520 873 21192081
chr17 7607641 7607651 TEAD1 JASPAR yes 7608520 869 21192082
chr17 7607641 7607651 TEAD4 JASPAR yes 7608520 869 21192083
chr17 7607642 7607650 TEAD3 JASPAR yes 7608520 870 21192084
chr17 7607655 7607664 THAP1 JASPAR yes 7608520 856 21192085
chr17 7607691 7607705 STAT1 JASPAR yes 7608520 815 21192086
chr17 7607707 7607717 SP1 JASPAR yes 7608520 803 21192087
chr17 7607708 7607723 TFAP2C JASPAR yes 7608520 797 21192088
chr17 7607718 7607723 GATA2 JASPAR yes 7608520 797 21192089
chr17 7607719 7607729 ALX3 JASPAR yes 7608520 791 21192090
chr17 7607719 7607729 ESX1 JASPAR yes 7608520 791 21192091
chr17 7607719 7607729 HESX1 JASPAR yes 7608520 791 21192092
chr17 7607720 7607728 DLX6 JASPAR yes 7608520 792 21192093
chr17 7607720 7607728 MSX2 JASPAR yes 7608520 792 21192094
chr17 7607725 7607733 FOXO3 JASPAR yes 7608520 787 21192095
chr17 7607726 7607744 NR3C1 JASPAR yes 7608520 776 21192096
chr17 7607733 7607744 FLI1 JASPAR yes 7608520 776 21192097
chr17 7607735 7607743 EHF JASPAR yes 7608520 777 21192098
chr17 7607752 7607764 INSM1 JASPAR yes 7608520 756 21192099
chr17 7607769 7607774 SP1 TRANSFAC yes 7608520 746 21192100
chr17 7607771 7607792 ZNF263 JASPAR yes 7608520 728 21192101
chr17 7607779 7607800 ZNF263 JASPAR yes 7608520 720 21192102
chr17 7607780 7607801 ZNF263 JASPAR yes 7608520 719 21192103
chr17 7607782 7607792 SP1 JASPAR yes 7608520 728 21192104
chr17 7607783 7607791 SP1 TRANSFAC yes 7608520 729 21192105
chr17 7607797 7607809 TFAP2A JASPAR yes 7608520 711 21192106
chr17 7607797 7607809 TFAP2B JASPAR yes 7608520 711 21192107
chr17 7607805 7607811 YY1 JASPAR yes 7608520 709 21192108
chr17 7607812 7607823 NFKB1 JASPAR yes 7608520 697 21192109
chr17 7607813 7607823 REL JASPAR yes 7608520 697 21192110
chr17 7607827 7608497 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 7608520 23 108234719
chr17 7607828 7607833 GATA2 JASPAR yes 7608520 687 21192111
chr17 7607828 7608404 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 7608520 116 108234720
chr17 7612941 7615883 ZBTB33 GTRD no Lung (A549) 7608520 4421 108234721
chr17 7612951 7615917 ZBTB33 GTRD no Lung (A549) 7608520 4431 108234722
chr17 7612954 7615869 ZBTB33 GTRD no Lung (A549) 7608520 4434 108234723
chr17 7612992 7616216 ZBTB33 GTRD no Lung (A549) 7608520 4472 108234724
chr17 7613018 7615662 ZBTB33 GTRD no Lung (A549) 7608520 4498 108234725
chr17 7613061 7615833 ZNF274 GTRD no Liver (HepG2) 7608520 4541 108234726
chr17 7613164 7615661 ZBTB33 GTRD no Lung (A549) 7608520 4644 108234727
chr17 7613257 7615836 ZBTB33 GTRD no Lung (A549) 7608520 4737 108234728
chr17 7613313 7615668 ZNF274 GTRD no Bone Marrow (K562) 7608520 4793 108234729
chr17 7613316 7615661 ZNF274 GTRD no Blood (GM12878) 7608520 4796 108234730
chr17 7613349 7615751 ZNF274 GTRD no Bone Marrow (K562) 7608520 4829 108234731
chr17 7613410 7615595 ZNF143 GTRD no Epithelial (MCF-7) 7608520 4890 108234732
chr17 7613421 7615705 ZBTB33 GTRD no Lung (A549) 7608520 4901 108234733
chr17 7613443 7615620 ZNF143 GTRD no Epithelial (MCF-7) 7608520 4923 108234734
chr17 7613445 7615652 ZNF274 GTRD no Cervix (HeLa-S3) 7608520 4925 108234735
chr17 7613453 7615908 ZNF274 GTRD no Blood (GM12878) 7608520 4933 108234736
chr17 7613457 7615784 STAT3 GTRD no Blood (OCI-LY7) 7608520 4937 108234737
chr17 7613479 7615864 ZNF274 GTRD no Blood (GM12878) 7608520 4959 108234738
SNPs associated with EFNB3[ENSG00000108947.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 7608462 rs12941981 C A 58 Esophagus 1.76924e-15 4730980
chr17 7620595 rs4246412 G A,T 5899 Esophagus 0.00059519 4731036
chr17 7620595 rs4246412 G A,T 5899 Pancreas 2.2371e-17 4731036
chr17 7608462 rs12941981 C A 58 Breast 5.49142e-06 4730980
chr17 7620595 rs4246412 G A,T 5899 Thyroid 8.05313e-15 4731036
chr17 7620595 rs4246412 G A,T 5899 Adrenal 0.000285058 4731036
Details of EFNB3[ENSG00000108947.4]
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Genomic Location chr17:7608520-7614696[+]
TSS 7608520
Gene Name EFNB3
Ensembl ID ENSG00000108947.4
ENTREZID 1949
Uniprot
Q15768
Protein Name
Ephrin-B3
Expression levels of EFNB3[ENSG00000108947.4]
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