EnhancerDB
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Enhancers that regulate SRM[ENSG00000116649.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 11015328 11024777 enh63991 11120081 95304
Pancreas Epithelial (MCF-7) Blood (GM12878) Heart
chr1 11031755 11038369 enh42881 11120081 81712
Muscle (Myotube) Prostate (RWPE1)
chr1 11040299 11040592 vista352 11120081 79489
VISTA
chr1 11045945 11054390 enh74140 11120081 65691
Bone Marrow (K562) Muscle (A673) Brain (SK-N-MC)
chr1 11050864 11051128 vista353 11120081 68953
VISTA
chr1 11122928 11123178 vista354 11120081 2847
VISTA
chr1 11210065 11214621 enh63992 11120081 89984
Heart
chr1 11218028 11218196 vista355 11120081 97947
VISTA
Transcript facotrs that regulate SRM[ENSG00000116649.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 11122574 11123258 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 11120081 2493 107802069
chr1 11122930 11122940 MZF1 JASPAR yes 11120081 2849 118229936
chr1 11122930 11122942 E2F8 JASPAR yes 11120081 2849 118229937
chr1 11122947 11122951 H1TF2 TRANSFAC yes 11120081 2866 118229938
chr1 11122947 11122951 NFE TRANSFAC yes 11120081 2866 118229939
chr1 11122947 11122951 SRF TRANSFAC yes 11120081 2866 118229940
chr1 11122966 11122971 MYC TRANSFAC yes 11120081 2885 118229941
chr1 11122978 11122986 ISL2 JASPAR yes 11120081 2897 118229942
chr1 11122978 11122987 NKX3-2 JASPAR yes 11120081 2897 118229943
chr1 11122995 11122998 MYB TRANSFAC yes 11120081 2914 118229944
chr1 11122998 11123002 NFE TRANSFAC yes 11120081 2917 118229945
chr1 11122999 11123004 GATA2 JASPAR yes 11120081 2918 118229946
chr1 11123023 11123041 SRF JASPAR yes 11120081 2942 118229947
chr1 11123029 11123033 TEAD2 TRANSFAC yes 11120081 2948 118229948
chr1 11123029 11123034 TBP TRANSFAC yes 11120081 2948 118229949
chr1 11123029 11123035 TFIID TRANSFAC yes 11120081 2948 118229950
chr1 11123033 11123054 ZNF263 JASPAR yes 11120081 2952 118229951
chr1 11123034 11123039 ETS2 TRANSFAC yes 11120081 2953 118229952
chr1 11123036 11123057 ZNF263 JASPAR yes 11120081 2955 118229953
chr1 11123042 11123063 ZNF263 JASPAR yes 11120081 2961 118229954
chr1 11123044 11123065 ZNF263 JASPAR yes 11120081 2963 118229955
chr1 11123045 11123066 ZNF263 JASPAR yes 11120081 2964 118229956
chr1 11123053 11123074 ZNF263 JASPAR yes 11120081 2972 118229957
chr1 11123067 11123082 NFYB JASPAR yes 11120081 2986 118229958
chr1 11123068 11123073 SP1 TRANSFAC yes 11120081 2987 118229959
chr1 11123069 11123085 NFYA JASPAR yes 11120081 2988 118229960
chr1 11123074 11123078 H1TF2 TRANSFAC yes 11120081 2993 118229961
chr1 11123074 11123078 NFE TRANSFAC yes 11120081 2993 118229962
chr1 11123074 11123078 SRF TRANSFAC yes 11120081 2993 118229963
chr1 11123084 11123099 STAT1 JASPAR yes 11120081 3003 118229964
chr1 11123086 11123097 STAT1 JASPAR yes 11120081 3005 118229965
chr1 11123090 11123095 ETS2 TRANSFAC yes 11120081 3009 118229966
chr1 11123090 11123098 FEV JASPAR yes 11120081 3009 118229967
chr1 11123111 11123125 CREB3 JASPAR yes 11120081 3030 118229968
chr1 11123111 11123125 CREB3L1 JASPAR yes 11120081 3030 118229969
chr1 11123112 11123122 MAX JASPAR yes 11120081 3031 118229970
chr1 11123112 11123123 USF1 JASPAR yes 11120081 3031 118229971
chr1 11123112 11123123 USF2 JASPAR yes 11120081 3031 118229972
chr1 11123112 11123124 HES5 JASPAR yes 11120081 3031 118229973
chr1 11123113 11123123 CLOCK JASPAR yes 11120081 3032 118229974
chr1 11123113 11123123 MAX JASPAR yes 11120081 3032 118229975
chr1 11123113 11123123 MLX JASPAR yes 11120081 3032 118229976
chr1 11123113 11123123 MNT JASPAR yes 11120081 3032 118229977
chr1 11123113 11123123 TFE3 JASPAR yes 11120081 3032 118229978
chr1 11123113 11123123 TFEB JASPAR yes 11120081 3032 118229979
chr1 11123113 11123124 USF1 JASPAR yes 11120081 3032 118229980
chr1 11123113 11123124 USF2 JASPAR yes 11120081 3032 118229981
chr1 11123114 11123121 USF1 JASPAR yes 11120081 3033 118229982
chr1 11123114 11123124 MAX JASPAR yes 11120081 3033 118229983
chr1 11123115 11123120 MYC TRANSFAC yes 11120081 3034 118229984
chr1 11123115 11123120 USF1 TRANSFAC yes 11120081 3034 118229985
chr1 11123115 11123120 USF2 TRANSFAC yes 11120081 3034 118229986
chr1 11123115 11123122 USF1 JASPAR yes 11120081 3034 118229987
chr1 11123126 11123139 SMAD2 JASPAR yes 11120081 3045 118229988
chr1 11123129 11123142 ZBED1 JASPAR yes 11120081 3048 118229989
chr1 11123130 11123134 NFE TRANSFAC yes 11120081 3049 118229990
chr1 11123157 11123167 NKX2-3 JASPAR yes 11120081 3076 118229991
chr1 11123158 11123167 NKX2-8 JASPAR yes 11120081 3077 118229992
chr1 11123162 11123171 JDP2 JASPAR yes 11120081 3081 118229993
chr1 11123162 11123173 JUNB JASPAR yes 11120081 3081 118229994
chr1 11123162 11123176 JUN JASPAR yes 11120081 3081 118229995
chr1 11123163 11123174 BATF JASPAR yes 11120081 3082 118229996
chr1 11123168 11123172 YY1 TRANSFAC yes 11120081 3087 118229997
SNPs associated with SRM[ENSG00000116649.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 11624078 rs145879397 G A 503997 Esophagus 0.0489175 79606
chr1 11234810 rs72871483 G A 114729 Pancreas 0.260253 77931
chr1 10558544 rs74994354 C T 556097 Spleen 0.244043 72226
chr1 12075075 rs35756106 G A 954994 Liver 0.169144 82831
chr1 12053475 rs371031427 C CA 933394 Adrenal 0.435253 82605
Details of SRM[ENSG00000116649.5]
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Genomic Location chr1:11114641-11120081[-]
TSS 11120081
Gene Name SRM
Ensembl ID ENSG00000116649.5
ENTREZID 6723
Uniprot
P19623
Protein Name
Spermidine synthase
Expression levels of SRM[ENSG00000116649.5]
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