EnhancerDB
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Enhancers that regulate GSC[ENSG00000133937.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr14 95138365 95142515 enh31144 95236562 94047
Astrocyte
chr14 95144985 95149915 enh92574 95236562 86647
Liver (HepG2) Brain (SK-N-MC)
chr14 95153945 95165115 enh75579 95236562 71447
Muscle (A673) Brain (SK-N-MC)
chr14 95203159 95207425 enh102506 95236562 29137
Bone (Osteoblast)
chr14 95213265 95217415 enh96548 95236562 19147
Epithelial (MCF-7)
chr14 95239496 95239653 vista18933 95236562 2934
VISTA
chr14 95240730 95240950 vista18934 95236562 4168
VISTA
chr14 95284085 95288235 enh75580 95236562 47523
Muscle (A673)
chr14 95288385 95296255 enh96549 95236562 51823
Uterus Epithelial (MCF-7)
chr14 95314774 95319302 enh89724 95236562 78212
Prostate (RWPE1)
chr14 95332345 95336495 enh88123 95236562 95783
Pancreas
chr14 95332963 95333341 vista18935 95236562 96401
VISTA
Transcript facotrs that regulate GSC[ENSG00000133937.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr14 95234504 95240900 EZH2 UCSC Txn Factor no Conserved 95236562 2058 108121010
chr14 95234504 95240900 EZH2 UCSC Txn Factor no Conserved 95236562 2058 108121011
chr14 95237102 95240594 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 95236562 540 108121012
chr14 95239178 95239699 ZNF143 GTRD no Epithelial (MCF-7) 95236562 2616 108121013
chr14 95239253 95239853 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 95236562 2691 108121014
chr14 95239290 95239600 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 95236562 2728 108121015
chr14 95239396 95239720 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 95236562 2834 108121016
chr14 95239508 95239516 FOXO3 JASPAR yes 95236562 2946 107603332
chr14 95239538 95239548 CEBPB JASPAR yes 95236562 2976 107603333
chr14 95239538 95239548 CEBPD JASPAR yes 95236562 2976 107603334
chr14 95239538 95239548 CEBPE JASPAR yes 95236562 2976 107603335
chr14 95239538 95239548 CEBPG JASPAR yes 95236562 2976 107603336
chr14 95239548 95239564 POU4F2 JASPAR yes 95236562 2986 107603337
chr14 95239553 95239556 MYB TRANSFAC yes 95236562 2991 107603338
chr14 95239585 95239600 RFX5 JASPAR yes 95236562 3023 107603339
chr14 95239597 95239606 SOX9 JASPAR yes 95236562 3035 107603340
chr14 95239836 95242579 ZNF143 GTRD no Epithelial (MCF-7) 95236562 3274 108121017
chr14 95240034 95242100 ZNF143 GTRD no Epithelial (MCF-7) 95236562 3472 108121018
chr14 95240098 95242475 ZNF143 GTRD no Epithelial (MCF-7) 95236562 3536 108121019
chr14 95240198 95242287 ZNF143 GTRD no Epithelial (MCF-7) 95236562 3636 108121020
chr14 95240202 95240802 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 95236562 3640 108121021
chr14 95240345 95242180 ZNF143 GTRD no Epithelial (MCF-7) 95236562 3783 108121022
chr14 95240389 95242414 ZNF143 GTRD no Epithelial (MCF-7) 95236562 3827 108121023
chr14 95240516 95242302 ZNF143 GTRD no Epithelial (MCF-7) 95236562 3954 108121024
chr14 95240574 95242348 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4012 108121025
chr14 95240608 95242202 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4046 108121026
chr14 95240739 95242201 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4177 108121027
chr14 95240747 95240761 FOXF2 JASPAR yes 95236562 4185 107603341
chr14 95240747 95240761 ONECUT2 JASPAR yes 95236562 4185 107603342
chr14 95240747 95240761 ONECUT3 JASPAR yes 95236562 4185 107603343
chr14 95240747 95240762 FOXP1 JASPAR yes 95236562 4185 107603344
chr14 95240748 95240763 FOXA1 JASPAR yes 95236562 4186 107603345
chr14 95240749 95240760 FOXB1 JASPAR yes 95236562 4187 107603346
chr14 95240749 95240760 FOXC1 JASPAR yes 95236562 4187 107603347
chr14 95240749 95240761 FOXC2 JASPAR yes 95236562 4187 107603348
chr14 95240749 95241971 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4187 108121028
chr14 95240749 95242220 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4187 108121029
chr14 95240750 95240762 FOXI1 JASPAR yes 95236562 4188 107603349
chr14 95240751 95240765 ONECUT2 JASPAR yes 95236562 4189 107603350
chr14 95240751 95240765 ONECUT3 JASPAR yes 95236562 4189 107603351
chr14 95240751 95240766 FOXP1 JASPAR yes 95236562 4189 107603352
chr14 95240751 95240766 HNF1A JASPAR yes 95236562 4189 107603353
chr14 95240752 95240766 POU4F1 JASPAR yes 95236562 4190 107603354
chr14 95240752 95240767 FOXA1 JASPAR yes 95236562 4190 107603355
chr14 95240752 95240768 POU4F2 JASPAR yes 95236562 4190 107603356
chr14 95240752 95240768 POU4F3 JASPAR yes 95236562 4190 107603357
chr14 95240753 95240764 FOXB1 JASPAR yes 95236562 4191 107603358
chr14 95240753 95240764 FOXC1 JASPAR yes 95236562 4191 107603359
chr14 95240753 95240764 PROP1 JASPAR yes 95236562 4191 107603360
chr14 95240753 95240765 FOXC2 JASPAR yes 95236562 4191 107603361
chr14 95240754 95240766 FOXI1 JASPAR yes 95236562 4192 107603362
chr14 95240754 95241779 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4192 108121030
chr14 95240755 95240769 ONECUT2 JASPAR yes 95236562 4193 107603363
chr14 95240755 95240769 ONECUT3 JASPAR yes 95236562 4193 107603364
chr14 95240755 95240770 FOXP1 JASPAR yes 95236562 4193 107603365
chr14 95240755 95240770 HNF1A JASPAR yes 95236562 4193 107603366
chr14 95240756 95240770 POU4F1 JASPAR yes 95236562 4194 107603367
chr14 95240756 95240771 FOXA1 JASPAR yes 95236562 4194 107603368
chr14 95240756 95240772 POU4F2 JASPAR yes 95236562 4194 107603369
chr14 95240756 95240772 POU4F3 JASPAR yes 95236562 4194 107603370
chr14 95240757 95240768 FOXB1 JASPAR yes 95236562 4195 107603371
chr14 95240757 95240768 FOXC1 JASPAR yes 95236562 4195 107603372
chr14 95240757 95240768 PROP1 JASPAR yes 95236562 4195 107603373
chr14 95240757 95240769 FOXC2 JASPAR yes 95236562 4195 107603374
chr14 95240758 95240770 FOXI1 JASPAR yes 95236562 4196 107603375
chr14 95240759 95240773 ONECUT2 JASPAR yes 95236562 4197 107603376
chr14 95240759 95240773 ONECUT3 JASPAR yes 95236562 4197 107603377
chr14 95240759 95240774 FOXP1 JASPAR yes 95236562 4197 107603378
chr14 95240759 95240774 HNF1A JASPAR yes 95236562 4197 107603379
chr14 95240760 95240774 POU4F1 JASPAR yes 95236562 4198 107603380
chr14 95240760 95240775 FOXA1 JASPAR yes 95236562 4198 107603381
chr14 95240760 95240776 POU4F2 JASPAR yes 95236562 4198 107603382
chr14 95240760 95240776 POU4F3 JASPAR yes 95236562 4198 107603383
chr14 95240761 95240772 FOXB1 JASPAR yes 95236562 4199 107603384
chr14 95240761 95240772 FOXC1 JASPAR yes 95236562 4199 107603385
chr14 95240761 95240772 PROP1 JASPAR yes 95236562 4199 107603386
chr14 95240761 95240773 FOXC2 JASPAR yes 95236562 4199 107603387
chr14 95240762 95240774 FOXI1 JASPAR yes 95236562 4200 107603388
chr14 95240763 95240777 ONECUT2 JASPAR yes 95236562 4201 107603389
chr14 95240763 95240777 ONECUT3 JASPAR yes 95236562 4201 107603390
chr14 95240763 95240778 FOXP1 JASPAR yes 95236562 4201 107603391
chr14 95240763 95240778 HNF1A JASPAR yes 95236562 4201 107603392
chr14 95240764 95240778 POU4F1 JASPAR yes 95236562 4202 107603393
chr14 95240764 95240779 FOXA1 JASPAR yes 95236562 4202 107603394
chr14 95240764 95240780 POU4F2 JASPAR yes 95236562 4202 107603395
chr14 95240764 95240780 POU4F3 JASPAR yes 95236562 4202 107603396
chr14 95240765 95240776 FOXB1 JASPAR yes 95236562 4203 107603397
chr14 95240765 95240776 FOXC1 JASPAR yes 95236562 4203 107603398
chr14 95240765 95240776 PROP1 JASPAR yes 95236562 4203 107603399
chr14 95240765 95240777 FOXC2 JASPAR yes 95236562 4203 107603400
chr14 95240766 95240778 FOXI1 JASPAR yes 95236562 4204 107603401
chr14 95240767 95240781 ONECUT2 JASPAR yes 95236562 4205 107603402
chr14 95240767 95240781 ONECUT3 JASPAR yes 95236562 4205 107603403
chr14 95240767 95240782 FOXP1 JASPAR yes 95236562 4205 107603404
chr14 95240767 95240782 HNF1A JASPAR yes 95236562 4205 107603405
chr14 95240768 95240782 POU4F1 JASPAR yes 95236562 4206 107603406
chr14 95240768 95240783 FOXA1 JASPAR yes 95236562 4206 107603407
chr14 95240768 95240784 POU4F2 JASPAR yes 95236562 4206 107603408
chr14 95240768 95240784 POU4F3 JASPAR yes 95236562 4206 107603409
chr14 95240769 95240780 FOXB1 JASPAR yes 95236562 4207 107603410
chr14 95240769 95240780 FOXC1 JASPAR yes 95236562 4207 107603411
chr14 95240769 95240780 PROP1 JASPAR yes 95236562 4207 107603412
chr14 95240769 95240781 FOXC2 JASPAR yes 95236562 4207 107603413
chr14 95240770 95240782 FOXI1 JASPAR yes 95236562 4208 107603414
chr14 95240771 95240786 HNF1A JASPAR yes 95236562 4209 107603415
chr14 95240773 95240784 FOXB1 JASPAR yes 95236562 4211 107603416
chr14 95240773 95240784 FOXC1 JASPAR yes 95236562 4211 107603417
chr14 95240774 95240786 FOXI1 JASPAR yes 95236562 4212 107603418
chr14 95240778 95240796 IRF2 JASPAR yes 95236562 4216 107603419
chr14 95240786 95240796 RELA JASPAR yes 95236562 4224 107603420
chr14 95240786 95240796 REL JASPAR yes 95236562 4224 107603421
chr14 95240786 95240797 NFKB1 JASPAR yes 95236562 4224 107603422
chr14 95240791 95240797 ETS1 JASPAR yes 95236562 4229 107603423
chr14 95240797 95242216 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4235 108121031
chr14 95240799 95242202 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4237 108121032
chr14 95240802 95242173 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4240 108121033
chr14 95240808 95241508 ZBTB33 GTRD no Brain (SK-N-SH) 95236562 4246 108121034
chr14 95240812 95240817 H4TF1 TRANSFAC yes 95236562 4250 107603424
chr14 95240826 95240830 YY1 TRANSFAC yes 95236562 4264 107603425
chr14 95240840 95240851 CEBPB JASPAR yes 95236562 4278 107603426
chr14 95240852 95242139 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4290 108121035
chr14 95240859 95240865 TCF4 TRANSFAC yes 95236562 4297 107603427
chr14 95240863 95242066 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4301 108121036
chr14 95240863 95242141 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4301 108121037
chr14 95240868 95242193 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4306 108121038
chr14 95240871 95242072 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4309 108121039
chr14 95240873 95240889 ZNF143 JASPAR yes 95236562 4311 107603428
chr14 95240877 95242084 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4315 108121040
chr14 95240878 95240890 POU2F1 JASPAR yes 95236562 4316 107603429
chr14 95240878 95240891 POU3F3 JASPAR yes 95236562 4316 107603430
chr14 95240878 95240892 POU1F1 JASPAR yes 95236562 4316 107603431
chr14 95240879 95240891 POU3F1 JASPAR yes 95236562 4317 107603432
chr14 95240879 95240891 POU3F2 JASPAR yes 95236562 4317 107603433
chr14 95240879 95240892 POU2F2 JASPAR yes 95236562 4317 107603434
chr14 95240880 95240889 POU3F4 JASPAR yes 95236562 4318 107603435
chr14 95240880 95240889 POU5F1B JASPAR yes 95236562 4318 107603436
chr14 95240881 95240888 POU2F1 TRANSFAC yes 95236562 4319 107603437
chr14 95240881 95240888 POU2F2 TRANSFAC yes 95236562 4319 107603438
chr14 95240882 95241541 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4320 108121041
chr14 95240911 95242171 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4349 108121042
chr14 95240913 95241789 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4351 108121043
chr14 95240921 95241736 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4359 108121044
chr14 95240942 95241553 ZNF143 GTRD no Epithelial (MCF-7) 95236562 4380 108121045
chr14 95240943 95240947 YY1 TRANSFAC yes 95236562 4381 107603439
SNPs associated with GSC[ENSG00000133937.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr14 95804943 rs2273388 C T 568381 Esophagus 0.0536209 3755324
chr14 95101343 rs997280 G A 133210 Esophagus 0.377155 3749709
chr14 96046341 rs34407217 G A 809779 Breast 0.279685 3757679
chr14 94841368 rs74074977 C T 393185 Ovary 0.418097 3748116
chr14 94322222 rs17129234 C A 912331 Uterus 0.284555 3744764
Details of GSC[ENSG00000133937.3]
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Genomic Location chr14:95234553-95236562[-]
TSS 95236562
Gene Name GSC
Ensembl ID ENSG00000133937.3
ENTREZID 145258
Uniprot
P56915
Protein Name
Homeobox protein goosecoid
Expression levels of GSC[ENSG00000133937.3]
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