EnhancerDB
  1. Home
  2. Gene
  3. PRPF4[ENSG00000136875.8]
Enhancers that regulate PRPF4[ENSG00000136875.8]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr9 115973680 115980755 enh10913 116037623 56868
Liver (HepG2) Blood (Karpas-422) Lung (PC-9)
chr9 115981344 115981857 vista63046 116037623 55766
VISTA
chr9 115982258 115982474 vista63047 116037623 55149
VISTA
chr9 115993205 116001657 enh10914 116037623 35966
Brain (SK-N-SH) Esophagus Lung Muscle (A673) Blood (Karpas-422) Lung (PC-9) Heart Blood (T-cell) Epithelial (MCF-7)
chr9 115995182 115995346 vista63048 116037623 42277
VISTA
chr9 116004965 116011495 enh10915 116037623 26128
Muscle (A673) Blood (Karpas-422)
chr9 116011576 116011925 vista63049 116037623 25698
VISTA
chr9 116031847 116032083 vista63050 116037623 5540
VISTA
chr9 116036635 116036980 vista63051 116037623 643
VISTA
chr9 116069598 116075135 enh66722 116037623 31975
Epithelial (MCF-7) Heart
chr9 116124185 116135415 enh110499 116037623 86562
Cervix (HeLa-S3) Stomach
chr9 116131358 116131644 vista63052 116037623 93735
VISTA
Transcript facotrs that regulate PRPF4[ENSG00000136875.8]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr9 116036649 116036654 GATA2 JASPAR yes 116037623 969 95402675
chr9 116036651 116036666 SCRT1 JASPAR yes 116037623 957 95402676
chr9 116036655 116036665 FIGLA JASPAR yes 116037623 958 95402677
chr9 116036676 116037052 CTCF UCSC Txn Factor no Conserved 116037623 571 108551562
chr9 116036688 116036692 YY1 TRANSFAC yes 116037623 931 95402678
chr9 116036693 116036697 YY1 TRANSFAC yes 116037623 926 95402679
chr9 116036698 116036708 TEAD1 JASPAR yes 116037623 915 95402680
chr9 116036698 116036708 TEAD4 JASPAR yes 116037623 915 95402681
chr9 116036702 116036707 ETS2 TRANSFAC yes 116037623 916 95402682
chr9 116036705 116036711 LEF1 TRANSFAC yes 116037623 912 95402683
chr9 116036705 116036711 SOX10 JASPAR yes 116037623 912 95402684
chr9 116036722 116036726 YY1 TRANSFAC yes 116037623 897 95402685
chr9 116036741 116036745 H1TF2 TRANSFAC yes 116037623 878 95402686
chr9 116036741 116036745 NFE TRANSFAC yes 116037623 878 95402687
chr9 116036741 116036745 SRF TRANSFAC yes 116037623 878 95402688
chr9 116036751 116036772 IRF1 JASPAR yes 116037623 851 95402689
chr9 116036751 116037019 RAD21 UCSC Txn Factor no Conserved 116037623 604 108551563
chr9 116036760 116036774 IRF7 JASPAR yes 116037623 849 95402690
chr9 116036762 116036774 IRF1 JASPAR yes 116037623 849 95402691
chr9 116036762 116036777 HNF4G JASPAR yes 116037623 846 95402692
chr9 116036763 116036777 NR2F1 JASPAR yes 116037623 846 95402693
chr9 116036763 116036778 HNF4A JASPAR yes 116037623 845 95402694
chr9 116036777 116036792 PRDM1 JASPAR yes 116037623 831 95402695
chr9 116036778 116036789 E2F6 JASPAR yes 116037623 834 95402696
chr9 116036780 116036801 ZNF263 JASPAR yes 116037623 822 95402697
chr9 116036781 116036802 ZNF263 JASPAR yes 116037623 821 95402698
chr9 116036793 116036798 GATA2 JASPAR yes 116037623 825 95402699
chr9 116036799 116036804 GATA2 JASPAR yes 116037623 819 95402700
chr9 116036819 116036833 ONECUT1 JASPAR yes 116037623 790 95402701
chr9 116036819 116036833 ONECUT3 JASPAR yes 116037623 790 95402702
chr9 116036831 116036835 YY1 TRANSFAC yes 116037623 788 95402703
chr9 116036843 116036857 MTF1 JASPAR yes 116037623 766 95402704
chr9 116036862 116036881 CTCF JASPAR yes 116037623 742 95402705
chr9 116036886 116036889 MYB TRANSFAC yes 116037623 734 95402706
chr9 116036909 116036924 HNF4G JASPAR yes 116037623 699 95402707
chr9 116036909 116036924 NR2C2 JASPAR yes 116037623 699 95402708
chr9 116036910 116036924 RXRB JASPAR yes 116037623 699 95402709
chr9 116036910 116036924 RXRG JASPAR yes 116037623 699 95402710
chr9 116036910 116036925 HNF4A JASPAR yes 116037623 698 95402711
chr9 116036915 116036926 ESRRA JASPAR yes 116037623 697 95402712
chr9 116036919 116036923 LFA1 TRANSFAC yes 116037623 700 95402713
chr9 116036929 116036938 PITX3 JASPAR yes 116037623 685 95402714
chr9 116036929 116036939 GSC2 JASPAR yes 116037623 684 95402715
chr9 116036930 116036938 OTX1 JASPAR yes 116037623 685 95402716
chr9 116036930 116036938 OTX2 JASPAR yes 116037623 685 95402717
chr9 116036930 116036938 RHOXF1 JASPAR yes 116037623 685 95402718
chr9 116036958 116036976 IRF2 JASPAR yes 116037623 647 95402719
chr9 116036959 116036980 IRF1 JASPAR yes 116037623 643 95402720
chr9 116036961 116036976 STAT2 JASPAR yes 116037623 647 95402721
chr9 116036962 116036976 STAT1 JASPAR yes 116037623 647 95402722
chr9 116036963 116036975 IRF1 JASPAR yes 116037623 648 95402723
chr9 116036968 116036972 YY1 TRANSFAC yes 116037623 651 95402724
SNPs associated with PRPF4[ENSG00000136875.8], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr9 116128229 rs2418250 C A 73044 Esophagus 2.85424e-11 11242907
chr9 116037894 rs3810919 C T 0 Heart 9.06933e-05 11242719
Details of PRPF4[ENSG00000136875.8]
Back to top
Genomic Location chr9:116037623-116055185[+]
TSS 116037623
Gene Name PRPF4
Ensembl ID ENSG00000136875.8
ENTREZID 9128
Uniprot
Q5T1M7
O43172
Protein Name
PRPF4 protein
U4/U6 small nuclear ribonucleoprotein Prp4,60 kDa U4/U6 snRNP-specific spliceosomal protein
Expression levels of PRPF4[ENSG00000136875.8]
Back to top