EnhancerDB
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Enhancers that regulate SELENBP1[ENSG00000143416.16]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 151244565 151248715 enh110656 151345209 96494
Cervix (HeLa-S3)
chr1 151249767 151250096 vista3273 151345209 95113
VISTA
chr1 151255796 151256115 vista3274 151345209 89094
VISTA
chr1 151281718 151287931 enh61900 151345209 57278
Esophagus Prostate (PC-3) Colon (HCT116) Heart
chr1 151284018 151284391 vista3275 151345209 60818
VISTA
chr1 151306945 151311295 enh98527 151345209 33914
Uterus
chr1 151344220 151344519 vista3276 151345209 690
VISTA
chr1 151355145 151362375 enh90715 151345209 9936
Bone Marrow (K562)
chr1 151386066 151386146 vista3277 151345209 40857
VISTA
chr1 151386845 151391435 enh89509 151345209 41636
Cervix (HeLa-S3) Prostate (RWPE1) Epithelial (MCF-7)
chr1 151405765 151409915 enh108371 151345209 60556
Lung (PC-9)
chr1 151414425 151423235 enh620 151345209 69216
Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Blood (T-cell)
chr1 151418157 151418544 vista3278 151345209 72948
VISTA
chr1 151422102 151422465 vista3279 151345209 76893
VISTA
chr1 151426145 151430295 enh621 151345209 80936
Blood (Karpas-422)
chr1 151443745 151454243 enh43051 151345209 98536
Blood (GM12878) Peripheral Blood (MM.1S) Colon (HCT116) Muscle (Myotube) Uterus
Transcript facotrs that regulate SELENBP1[ENSG00000143416.16]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 151343048 151345441 ZNF274 GTRD no Blood (GM12878) 151345209 232 107829365
chr1 151343073 151345307 ZNF274 GTRD no Blood (GM12878) 151345209 98 107829366
chr1 151343746 151344250 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 151345209 959 107829367
chr1 151343757 151345467 ZNF274 GTRD no Blood (GM12878) 151345209 258 107829368
chr1 151343794 151344373 ZNF143 GTRD no Epithelial (MCF-7) 151345209 836 107829369
chr1 151344235 151344888 ZNF274 GTRD no Blood (GM12878) 151345209 321 107829370
chr1 151344240 151344260 RREB1 JASPAR yes 151345209 949 118368029
chr1 151344242 151344262 RREB1 JASPAR yes 151345209 947 118368030
chr1 151344244 151344264 RREB1 JASPAR yes 151345209 945 118368031
chr1 151344245 151344265 RREB1 JASPAR yes 151345209 944 118368032
chr1 151344247 151344267 RREB1 JASPAR yes 151345209 942 118368033
chr1 151344250 151344265 RFX5 JASPAR yes 151345209 944 118368034
chr1 151344250 151344270 RREB1 JASPAR yes 151345209 939 118368035
chr1 151344258 151344270 INSM1 JASPAR yes 151345209 939 118368036
chr1 151344262 151344270 SP1 TRANSFAC yes 151345209 939 118368037
chr1 151344273 151344277 YY1 TRANSFAC yes 151345209 932 118368038
chr1 151344283 151344287 ESR1 TRANSFAC yes 151345209 922 118368039
chr1 151344302 151344721 ZNF274 GTRD no Blood (GM12878) 151345209 488 107829371
chr1 151344303 151344318 TFAP2C JASPAR yes 151345209 891 118368040
chr1 151344306 151344317 EBF1 JASPAR yes 151345209 892 118368041
chr1 151344306 151344317 TFAP2A JASPAR yes 151345209 892 118368042
chr1 151344306 151344317 TFAP2B JASPAR yes 151345209 892 118368043
chr1 151344306 151344317 TFAP2C JASPAR yes 151345209 892 118368044
chr1 151344307 151344316 TFAP2A JASPAR yes 151345209 893 118368045
chr1 151344322 151344612 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 151345209 597 107829372
chr1 151344323 151344330 SPIB JASPAR yes 151345209 879 118368046
chr1 151344326 151344343 BCL6B JASPAR yes 151345209 866 118368047
chr1 151344333 151344338 TFAP2A TRANSFAC yes 151345209 871 118368048
chr1 151344333 151344339 MZF1 JASPAR yes 151345209 870 118368049
chr1 151344333 151344346 NFKB1 JASPAR yes 151345209 863 118368050
chr1 151344333 151344346 NFKB2 JASPAR yes 151345209 863 118368051
chr1 151344334 151344344 REL JASPAR yes 151345209 865 118368052
chr1 151344334 151344345 NFKB1 JASPAR yes 151345209 864 118368053
chr1 151344334 151344347 NFKB1 JASPAR yes 151345209 862 118368054
chr1 151344334 151344347 NFKB2 JASPAR yes 151345209 862 118368055
chr1 151344335 151344345 NFKB1 JASPAR yes 151345209 864 118368056
chr1 151344336 151344346 NFKB1 JASPAR yes 151345209 863 118368057
chr1 151344336 151344346 RELA JASPAR yes 151345209 863 118368058
chr1 151344336 151344346 REL JASPAR yes 151345209 863 118368059
chr1 151344340 151344350 GCM2 JASPAR yes 151345209 859 118368060
chr1 151344379 151344391 IRF1 JASPAR yes 151345209 818 118368061
chr1 151344394 151344411 BCL6B JASPAR yes 151345209 798 118368062
chr1 151344409 151344418 NKX2-8 JASPAR yes 151345209 791 118368063
chr1 151344409 151344419 NKX2-3 JASPAR yes 151345209 790 118368064
chr1 151344415 151344425 RELA JASPAR yes 151345209 784 118368065
chr1 151344415 151344425 REL JASPAR yes 151345209 784 118368066
chr1 151344415 151344426 NFKB1 JASPAR yes 151345209 783 118368067
chr1 151344418 151344428 NFATC3 JASPAR yes 151345209 781 118368068
chr1 151344419 151344426 NFATC2 JASPAR yes 151345209 783 118368069
chr1 151344431 151344841 ZNF274 GTRD no Blood (GM12878) 151345209 368 107829373
chr1 151344439 151344448 HIC2 JASPAR yes 151345209 761 118368070
chr1 151344441 151344455 TLX1 JASPAR yes 151345209 754 118368071
chr1 151344442 151344446 LFA1 TRANSFAC yes 151345209 763 118368072
chr1 151344457 151344471 TLX1 JASPAR yes 151345209 738 118368073
chr1 151344493 151344498 ETS2 TRANSFAC yes 151345209 711 118368074
SNPs associated with SELENBP1[ENSG00000143416.16], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 151031667 rs3806386 T A,C 305111 Esophagus 0.120296 623963
chr1 151790339 rs7540034 G C 445130 Esophagus 0.246621 626990
chr1 151344150 rs2769265 C A 0 Heart 0.0912065 624881
chr1 151343545 rs61818027 T C 0 Pancreas 0.0140363 624873
chr1 151171353 rs182830202 C T 165425 Breast 0.226802 624275
Details of SELENBP1[ENSG00000143416.16]
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Genomic Location chr1:151336778-151345209[-]
TSS 151345209
Gene Name SELENBP1
Ensembl ID ENSG00000143416.16
ENTREZID 8991
Uniprot
V9HWG1
Q13228
Protein Name
isoform CRA_b
Selenium binding protein 1
Selenium-binding protein 1
Expression levels of SELENBP1[ENSG00000143416.16]
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