EnhancerDB
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Enhancers that regulate ABCA12[ENSG00000144452.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 215923685 215927835 enh112949 216003151 75316
Brain (SK-N-MC)
chr2 215932345 215938769 enh19191 216003151 64382
Skin (Keratinocyte) Placenta Lung (PC-9) Epithelial (MCF-7)
chr2 215943345 215947495 enh112950 216003151 55656
Brain (SK-N-MC)
chr2 215964526 215964926 vista34614 216003151 38225
VISTA
chr2 215967065 215976255 enh19192 216003151 26896
Skin (Keratinocyte) Prostate (PC-3) Esophagus Placenta Lung (PC-9)
chr2 215971469 215971483 vista34615 216003151 31668
VISTA
chr2 216001903 216002158 vista34616 216003151 993
VISTA
chr2 216005120 216005365 vista34617 216003151 1969
VISTA
chr2 216024245 216028395 enh82089 216003151 21094
Prostate (PC-3)
chr2 216029425 216033575 enh97064 216003151 26274
Epithelial (MCF-7)
chr2 216034645 216038795 enh97065 216003151 31494
Epithelial (MCF-7)
chr2 216051990 216056624 enh59019 216003151 48839
Esophagus Skin (Keratinocyte) Prostate (RWPE1)
chr2 216079645 216085616 enh90042 216003151 76494
Prostate (RWPE1) Epithelial (MCF-7)
chr2 216101245 216109915 enh76556 216003151 98094
Muscle (A673) Epithelial (MCF-7)
Transcript facotrs that regulate ABCA12[ENSG00000144452.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 216001900 216002005 GATA3 UCSC Txn Factor no Conserved 216003151 1146 108435054
chr2 216001914 216001934 RREB1 JASPAR yes 216003151 1217 22203402
chr2 216001916 216001930 TCF7L2 JASPAR yes 216003151 1221 22203403
chr2 216001937 216001950 SMAD2 JASPAR yes 216003151 1201 22203404
chr2 216001957 216001972 TFAP2C JASPAR yes 216003151 1179 22203405
chr2 216001967 216001981 GATA2 JASPAR yes 216003151 1170 22203406
chr2 216001969 216001977 GATA3 JASPAR yes 216003151 1174 22203407
chr2 216001969 216001977 GATA5 JASPAR yes 216003151 1174 22203408
chr2 216001982 216001990 GATA3 JASPAR yes 216003151 1161 22203409
chr2 216002004 216002016 POU3F1 JASPAR yes 216003151 1135 22203410
chr2 216002004 216002017 POU2F2 JASPAR yes 216003151 1134 22203411
chr2 216002010 216002025 FOXA1 JASPAR yes 216003151 1126 22203412
chr2 216002012 216002024 FOXC2 JASPAR yes 216003151 1127 22203413
chr2 216002012 216002025 POU2F2 JASPAR yes 216003151 1126 22203414
chr2 216002012 216002026 POU1F1 JASPAR yes 216003151 1125 22203415
chr2 216002013 216002024 FOXB1 JASPAR yes 216003151 1127 22203416
chr2 216002013 216002024 FOXC1 JASPAR yes 216003151 1127 22203417
chr2 216002013 216002025 POU3F1 JASPAR yes 216003151 1126 22203418
chr2 216002013 216002025 POU3F2 JASPAR yes 216003151 1126 22203419
chr2 216002013 216002026 POU3F3 JASPAR yes 216003151 1125 22203420
chr2 216002014 216002018 YY1 TRANSFAC yes 216003151 1133 22203421
chr2 216002014 216002026 POU2F1 JASPAR yes 216003151 1125 22203422
chr2 216002015 216002022 POU2F1 TRANSFAC yes 216003151 1129 22203423
chr2 216002015 216002022 POU2F2C TRANSFAC yes 216003151 1129 22203424
chr2 216002015 216002022 POU2F2 TRANSFAC yes 216003151 1129 22203425
chr2 216002015 216002023 POU2F1 TRANSFAC yes 216003151 1128 22203426
chr2 216002015 216002024 POU3F4 JASPAR yes 216003151 1127 22203427
chr2 216002015 216002024 POU5F1B JASPAR yes 216003151 1127 22203428
chr2 216002021 216002036 FOXA1 JASPAR yes 216003151 1115 22203429
chr2 216002023 216002035 FOXC2 JASPAR yes 216003151 1116 22203430
chr2 216002023 216002036 POU2F2 JASPAR yes 216003151 1115 22203431
chr2 216002024 216002035 FOXB1 JASPAR yes 216003151 1116 22203432
chr2 216002024 216002035 FOXC1 JASPAR yes 216003151 1116 22203433
chr2 216002024 216002036 POU3F1 JASPAR yes 216003151 1115 22203434
chr2 216002024 216002036 POU3F2 JASPAR yes 216003151 1115 22203435
chr2 216002024 216002037 POU3F3 JASPAR yes 216003151 1114 22203436
chr2 216002025 216002029 YY1 TRANSFAC yes 216003151 1122 22203437
chr2 216002025 216002036 FOXA1 JASPAR yes 216003151 1115 22203438
chr2 216002026 216002035 POU3F4 JASPAR yes 216003151 1116 22203439
chr2 216002026 216002035 POU5F1B JASPAR yes 216003151 1116 22203440
chr2 216002029 216002045 POU4F3 JASPAR yes 216003151 1106 22203441
chr2 216002031 216002035 YY1 TRANSFAC yes 216003151 1116 22203442
chr2 216002031 216002042 FOSL1 JASPAR yes 216003151 1109 22203443
chr2 216002031 216002042 JUND JASPAR yes 216003151 1109 22203444
chr2 216002031 216002045 POU4F1 JASPAR yes 216003151 1106 22203445
chr2 216002032 216002041 JDP2 JASPAR yes 216003151 1110 22203446
chr2 216002032 216002043 FOSL2 JASPAR yes 216003151 1108 22203447
chr2 216002032 216002043 JUNB JASPAR yes 216003151 1108 22203448
chr2 216002033 216002044 BATF JASPAR yes 216003151 1107 22203449
chr2 216002049 216002059 NFKB1 JASPAR yes 216003151 1092 22203450
chr2 216002049 216002059 REL JASPAR yes 216003151 1092 22203451
chr2 216002056 216002065 NKX3-2 JASPAR yes 216003151 1086 22203452
chr2 216002076 216002081 MYB TRANSFAC yes 216003151 1070 22203453
chr2 216002089 216002099 RELA JASPAR yes 216003151 1052 22203454
chr2 216002090 216002100 RELA JASPAR yes 216003151 1051 22203455
chr2 216002090 216002101 NFKB1 JASPAR yes 216003151 1050 22203456
chr2 216002092 216002097 H4TF1 TRANSFAC yes 216003151 1054 22203457
chr2 216002109 216002121 TEAD1 JASPAR yes 216003151 1030 22203458
chr2 216002125 216002129 TEAD2 TRANSFAC yes 216003151 1022 22203459
chr2 216002127 216002130 MYB TRANSFAC yes 216003151 1021 22203460
chr2 216002130 216002145 STAT1 JASPAR yes 216003151 1006 22203461
chr2 216002133 216002149 ZNF143 JASPAR yes 216003151 1002 22203462
chr2 216002143 216002147 H1TF2 TRANSFAC yes 216003151 1004 22203463
chr2 216002143 216002147 NFE TRANSFAC yes 216003151 1004 22203464
chr2 216002143 216002147 SRF TRANSFAC yes 216003151 1004 22203465
chr2 216002147 216002152 ETS2 TRANSFAC yes 216003151 999 22203466
chr2 216005128 216005134 YY1 JASPAR yes 216003151 1977 22203467
chr2 216005173 216005191 NR3C1 JASPAR yes 216003151 2022 22203468
chr2 216005176 216005180 ESR1 TRANSFAC yes 216003151 2025 22203469
chr2 216005176 216005191 AR JASPAR yes 216003151 2025 22203470
chr2 216005195 216005209 IRF7 JASPAR yes 216003151 2044 22203471
chr2 216005197 216005212 SOX21 JASPAR yes 216003151 2046 22203472
chr2 216005197 216005213 SOX4 JASPAR yes 216003151 2046 22203473
chr2 216005222 216005236 JUN JASPAR yes 216003151 2071 22203474
chr2 216005224 216005235 BATF JASPAR yes 216003151 2073 22203475
chr2 216005231 216005240 NKX2-8 JASPAR yes 216003151 2080 22203476
chr2 216005239 216005242 MYB TRANSFAC yes 216003151 2088 22203477
chr2 216005258 216005265 NFATC2 JASPAR yes 216003151 2107 22203478
chr2 216005258 216005269 STAT3 JASPAR yes 216003151 2107 22203479
chr2 216005268 216005288 RREB1 JASPAR yes 216003151 2117 22203480
chr2 216005271 216005291 RREB1 JASPAR yes 216003151 2120 22203481
chr2 216005272 216005292 RREB1 JASPAR yes 216003151 2121 22203482
chr2 216005273 216005293 RREB1 JASPAR yes 216003151 2122 22203483
chr2 216005274 216005289 RUNX2 JASPAR yes 216003151 2123 22203484
chr2 216005275 216005295 RREB1 JASPAR yes 216003151 2124 22203485
chr2 216005276 216005296 RREB1 JASPAR yes 216003151 2125 22203486
chr2 216005280 216005290 ZNF740 JASPAR yes 216003151 2129 22203487
chr2 216005284 216005294 SP1 JASPAR yes 216003151 2133 22203488
chr2 216005296 216005309 DUXA JASPAR yes 216003151 2145 22203489
chr2 216005297 216005308 DUX4 JASPAR yes 216003151 2146 22203490
chr2 216005300 216005314 JUN JASPAR yes 216003151 2149 22203491
chr2 216005315 216005330 FOXP1 JASPAR yes 216003151 2164 22203492
chr2 216005316 216005327 FOXP2 JASPAR yes 216003151 2165 22203493
chr2 216005318 216005326 FOXO3 JASPAR yes 216003151 2167 22203494
chr2 216005319 216005334 STAT1 JASPAR yes 216003151 2168 22203495
chr2 216005321 216005332 STAT1 JASPAR yes 216003151 2170 22203496
chr2 216005321 216005332 STAT3 JASPAR yes 216003151 2170 22203497
chr2 216005322 216005338 ZNF143 JASPAR yes 216003151 2171 22203498
chr2 216005324 216005334 HOXA13 JASPAR yes 216003151 2173 22203499
chr2 216005324 216005334 HOXB13 JASPAR yes 216003151 2173 22203500
chr2 216005333 216005339 LEF1 TRANSFAC yes 216003151 2182 22203501
chr2 216005333 216005339 SOX10 JASPAR yes 216003151 2182 22203502
chr2 216005345 216005351 GATA3 JASPAR yes 216003151 2194 22203503
SNPs associated with ABCA12[ENSG00000144452.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 215969156 rs71428363 G A 0 Breast 0.0836245 6343789
Details of ABCA12[ENSG00000144452.10]
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Genomic Location chr2:215796266-216003151[-]
TSS 216003151
Gene Name ABCA12
Ensembl ID ENSG00000144452.10
ENTREZID 26154
Uniprot
Q86UK0
B3KVV3
Protein Name
ATP-binding cassette sub-family A member 12
Expression levels of ABCA12[ENSG00000144452.10]
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