EnhancerDB
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Enhancers that regulate NTRK1[ENSG00000198400.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 156680485 156687382 enh85981 156785432 98050
Colon (HCT116) Lung (PC-9)
chr1 156718467 156719136 vista3481 156785432 66296
VISTA
chr1 156719450 156719815 vista3482 156785432 65617
VISTA
chr1 156724285 156728435 enh12302 156785432 56997
Placenta
chr1 156769222 156776015 enh61910 156785432 9417
Esophagus Muscle (A673) Brain (SK-N-SH)
chr1 156774360 156774606 vista3483 156785432 10826
VISTA
chr1 156781780 156782101 vista3484 156785432 3331
VISTA
chr1 156796605 156800755 enh79220 156785432 11173
Prostate (PC-3)
chr1 156801485 156805635 enh103109 156785432 16053
Peripheral Blood (MM.1S)
chr1 156805999 156806129 vista3485 156785432 20567
VISTA
chr1 156860185 156870715 enh12303 156785432 74753
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Lung Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
chr1 156864713 156865066 vista3486 156785432 79281
VISTA
chr1 156874611 156880476 enh102387 156785432 89179
Bone (Osteoblast)
Transcript facotrs that regulate NTRK1[ENSG00000198400.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 156781268 156781971 ZNF274 GTRD no Bone Marrow (K562) 156785432 3461 107837644
chr1 156781318 156781918 ZBTB33 GTRD no Brain (SK-N-SH) 156785432 3514 107837645
chr1 156781375 156781886 ZBTB33 GTRD no Brain (SK-N-SH) 156785432 3546 107837646
chr1 156781388 156781980 ZBTB33 GTRD no Brain (SK-N-SH) 156785432 3452 107837647
chr1 156781393 156782056 ZNF274 GTRD no Bone Marrow (K562) 156785432 3376 107837648
chr1 156781425 156781938 ZNF143 GTRD no Epithelial (MCF-7) 156785432 3494 107837649
chr1 156781494 156781858 ZBTB33 GTRD no Brain (SK-N-SH) 156785432 3574 107837650
chr1 156781504 156781975 ZBTB33 GTRD no Brain (SK-N-SH) 156785432 3457 107837651
chr1 156781532 156782475 TEF1 GTRD no Bone (Osteoblast) 156785432 2957 107837652
chr1 156781554 156781877 ZBTB33 GTRD no Brain (SK-N-SH) 156785432 3555 107837653
chr1 156781562 156781850 TCF7L2 GTRD no Colon (HCT116) 156785432 3582 107837654
chr1 156781581 156782076 ZNF274 GTRD no Bone Marrow (K562) 156785432 3356 107837655
chr1 156781795 156781805 CLOCK JASPAR yes 156785432 3627 118378855
chr1 156781795 156781805 HEY1 JASPAR yes 156785432 3627 118378856
chr1 156781795 156781805 MNT JASPAR yes 156785432 3627 118378857
chr1 156781797 156781802 MYC TRANSFAC yes 156785432 3630 118378858
chr1 156781797 156781802 USF1 TRANSFAC yes 156785432 3630 118378859
chr1 156781797 156781802 USF2 TRANSFAC yes 156785432 3630 118378860
chr1 156781800 156781815 FOXP1 JASPAR yes 156785432 3617 118378861
chr1 156781803 156781814 FOXP2 JASPAR yes 156785432 3618 118378862
chr1 156781811 156781828 RXRA JASPAR yes 156785432 3604 118378863
chr1 156781820 156781831 USF1 JASPAR yes 156785432 3601 118378864
chr1 156781820 156781831 USF2 JASPAR yes 156785432 3601 118378865
chr1 156781823 156781828 USF2 TRANSFAC yes 156785432 3604 118378866
chr1 156781849 156781864 HSF1 JASPAR yes 156785432 3568 118378867
chr1 156781884 156781905 ZNF263 JASPAR yes 156785432 3527 118378868
chr1 156781887 156781908 ZNF263 JASPAR yes 156785432 3524 118378869
chr1 156781889 156781902 EOMES JASPAR yes 156785432 3530 118378870
chr1 156781891 156781901 TBR1 JASPAR yes 156785432 3531 118378871
chr1 156781891 156781902 TBX2 JASPAR yes 156785432 3530 118378872
chr1 156781906 156781910 H1TF2 TRANSFAC yes 156785432 3522 118378873
chr1 156781906 156781910 NFE TRANSFAC yes 156785432 3522 118378874
chr1 156781906 156781910 SRF TRANSFAC yes 156785432 3522 118378875
chr1 156781906 156781923 ZNF410 JASPAR yes 156785432 3509 118378876
chr1 156781907 156781927 RREB1 JASPAR yes 156785432 3505 118378877
chr1 156781908 156781923 RUNX2 JASPAR yes 156785432 3509 118378878
chr1 156781926 156781945 CTCF JASPAR yes 156785432 3487 118378879
chr1 156781947 156781968 ZNF263 JASPAR yes 156785432 3464 118378880
chr1 156781959 156781978 CTCF JASPAR yes 156785432 3454 118378881
chr1 156781961 156781980 CTCF JASPAR yes 156785432 3452 118378882
chr1 156781973 156781985 ZBTB7A JASPAR yes 156785432 3447 118378883
chr1 156781999 156782267 ZNF274 GTRD no Blood (GM12878) 156785432 3165 107837656
chr1 156782002 156782011 THAP1 JASPAR yes 156785432 3421 118378884
chr1 156782004 156782010 YY1 JASPAR yes 156785432 3422 118378885
chr1 156782009 156782013 YY1 TRANSFAC yes 156785432 3419 118378886
chr1 156782037 156782057 TP63 JASPAR yes 156785432 3375 118378887
chr1 156782038 156782056 TP53 JASPAR yes 156785432 3376 118378888
chr1 156782038 156782056 TP73 JASPAR yes 156785432 3376 118378889
chr1 156782039 156782059 TP53 JASPAR yes 156785432 3373 118378890
chr1 156782079 156782093 CREB3L1 JASPAR yes 156785432 3339 118378891
SNPs associated with NTRK1[ENSG00000198400.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 155839794 rs6663312 T C 945638 Esophagus 0.240892 645927
chr1 156612157 rs113194954 C T 173275 Heart 0.234087 650091
chr1 156494903 rs12138558 T C 290529 Pancreas 0.407119 649200
chr1 157467029 rs34402177 C T 615387 Spleen 0.214172 655451
chr1 157456264 rs72706313 G C 604622 Ovary 0.418238 655260
chr1 157366996 rs12048490 T C 515354 Thyroid 0.11453 654938
chr1 157480665 rs28571769 C A 629023 Liver 0.304287 655648
chr1 156632189 rs373233604 CGAAAG C 153243 Stomach 0.40051 650212
Details of NTRK1[ENSG00000198400.7]
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Genomic Location chr1:156785432-156851642[+]
TSS 156785432
Gene Name NTRK1
Ensembl ID ENSG00000198400.7
ENTREZID 4914
Uniprot
X5DR71
P04629
Protein Name
High affinity nerve growth factor receptor
Tyrosine-protein kinase receptor
Expression levels of NTRK1[ENSG00000198400.7]
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