EnhancerDB
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Enhancers that regulate LCE3C[ENSG00000244057.2]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 152472245 152477785 enh12265 152573138 95353
Esophagus Skin (Keratinocyte) Placenta Epithelial (MCF-7)
chr1 152495845 152499995 enh49980 152573138 73143
Large Intestine
chr1 152547767 152551955 enh43052 152573138 21183
Muscle (Myotube)
chr1 152569943 152570201 vista3323 152573138 2937
VISTA
chr1 152610699 152615261 enh43053 152573138 37561
Muscle (Myoblast) Muscle (Myotube)
chr1 152626575 152626861 vista3324 152573138 53437
VISTA
Transcript facotrs that regulate LCE3C[ENSG00000244057.2]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 152569948 152569956 OTX2 JASPAR yes 152573138 3182 118370350
chr1 152569949 152569966 RARA JASPAR yes 152573138 3172 118370351
chr1 152569995 152570005 NKX2-3 JASPAR yes 152573138 3133 118370352
chr1 152570019 152570031 TAL1 JASPAR yes 152573138 3107 118370353
chr1 152570021 152570031 NEUROG2 JASPAR yes 152573138 3107 118370354
chr1 152570039 152570050 HOXA10 JASPAR yes 152573138 3088 118370355
chr1 152570040 152570050 EN2 JASPAR yes 152573138 3088 118370356
chr1 152570040 152570050 GBX1 JASPAR yes 152573138 3088 118370357
chr1 152570040 152570050 GBX2 JASPAR yes 152573138 3088 118370358
chr1 152570040 152570050 HESX1 JASPAR yes 152573138 3088 118370359
chr1 152570040 152570050 MNX1 JASPAR yes 152573138 3088 118370360
chr1 152570040 152570050 RAX JASPAR yes 152573138 3088 118370361
chr1 152570041 152570049 BARX1 JASPAR yes 152573138 3089 118370362
chr1 152570041 152570049 BSX JASPAR yes 152573138 3089 118370363
chr1 152570041 152570049 ISL2 JASPAR yes 152573138 3089 118370364
chr1 152570041 152570049 LMX1B JASPAR yes 152573138 3089 118370365
chr1 152570041 152570049 MSX1 JASPAR yes 152573138 3089 118370366
chr1 152570041 152570049 MSX2 JASPAR yes 152573138 3089 118370367
chr1 152570045 152570061 ZNF143 JASPAR yes 152573138 3077 118370368
chr1 152570049 152570065 SOX4 JASPAR yes 152573138 3073 118370369
chr1 152570050 152570060 SP1 JASPAR yes 152573138 3078 118370370
chr1 152570058 152570069 FOXP2 JASPAR yes 152573138 3069 118370371
chr1 152570085 152570106 REST JASPAR yes 152573138 3032 118370372
chr1 152570086 152570101 HNF4G JASPAR yes 152573138 3037 118370373
chr1 152570087 152570102 HNF4A JASPAR yes 152573138 3036 118370374
chr1 152570091 152570097 SOX10 JASPAR yes 152573138 3041 118370375
chr1 152570096 152570100 LFA1 TRANSFAC yes 152573138 3038 118370376
chr1 152570121 152570127 NFIC JASPAR yes 152573138 3011 118370377
chr1 152570123 152570133 NHLH1 JASPAR yes 152573138 3005 118370378
chr1 152570135 152570147 INSM1 JASPAR yes 152573138 2991 118370379
chr1 152570140 152570145 SP1 TRANSFAC yes 152573138 2993 118370380
chr1 152570141 152570153 TAL1 JASPAR yes 152573138 2985 118370381
chr1 152570141 152570154 ZBTB18 JASPAR yes 152573138 2984 118370382
chr1 152570143 152570153 NEUROG2 JASPAR yes 152573138 2985 118370383
chr1 152570143 152570155 TAL1 JASPAR yes 152573138 2983 118370384
chr1 152570162 152570172 EN2 JASPAR yes 152573138 2966 118370385
chr1 152570162 152570172 GBX1 JASPAR yes 152573138 2966 118370386
chr1 152570162 152570172 GBX2 JASPAR yes 152573138 2966 118370387
chr1 152570162 152570172 HOXA2 JASPAR yes 152573138 2966 118370388
chr1 152570163 152570171 DLX6 JASPAR yes 152573138 2967 118370389
chr1 152570163 152570171 MSX1 JASPAR yes 152573138 2967 118370390
chr1 152570175 152570189 GATA2 JASPAR yes 152573138 2949 118370391
chr1 152570179 152570187 GATA3 JASPAR yes 152573138 2951 118370392
chr1 152570179 152570187 GATA5 JASPAR yes 152573138 2951 118370393
chr1 152570194 152570199 TFAP2A TRANSFAC yes 152573138 2939 118370394
chr1 152570194 152570200 MZF1 JASPAR yes 152573138 2938 118370395
SNPs associated with LCE3C[ENSG00000244057.2], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of LCE3C[ENSG00000244057.2]
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Genomic Location chr1:152573138-152573562[+]
TSS 152573138
Gene Name LCE3C
Ensembl ID ENSG00000244057.2
ENTREZID 353144
Uniprot
Q5T5A8
Protein Name
Late cornified envelope protein 3C
Expression levels of LCE3C[ENSG00000244057.2]
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