EnhancerDB
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Enhancers that regulate PTX4[ENSG00000251692.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 1519780 1519909 vista21550 1538982 19073
VISTA
chr16 1522812 1522824 vista21551 1538982 16158
VISTA
chr16 1530385 1534535 enh31665 1538982 4447
Astrocyte
chr16 1578445 1582935 enh16495 1538982 39463
Placenta
chr16 1581133 1581345 vista21552 1538982 42151
VISTA
chr16 1585533 1585949 vista21553 1538982 46551
VISTA
chr16 1585996 1586318 vista21554 1538982 47014
VISTA
chr16 1586805 1602380 enh31666 1538982 47823
Liver (HepG2) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Uterus Thymus Heart
chr16 1587113 1587406 vista21555 1538982 48131
VISTA
chr16 1607525 1611675 enh107659 1538982 68543
Blood (T-cell)
Transcript facotrs that regulate PTX4[ENSG00000251692.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 1533989 1534001 FOXI1 JASPAR yes 1538982 4981 9151233
chr16 1534001 1534022 IRF1 JASPAR yes 1538982 4960 9151234
chr16 1534005 1534020 IRF9 JASPAR yes 1538982 4962 9151235
chr16 1534012 1534024 FOXI1 JASPAR yes 1538982 4958 9151236
chr16 1534015 1534019 YY1 TRANSFAC yes 1538982 4963 9151237
chr16 1534036 1534049 POU2F2 JASPAR yes 1538982 4933 9151238
chr16 1534055 1534066 FOXP2 JASPAR yes 1538982 4916 9151239
chr16 1534064 1534073 SNAI2 JASPAR yes 1538982 4909 9151240
chr16 1534084 1534089 TFAP2A TRANSFAC yes 1538982 4893 9151241
chr16 1534084 1534090 MZF1 JASPAR yes 1538982 4892 9151242
chr16 1534084 1534094 SP1 JASPAR yes 1538982 4888 9151243
chr16 1534086 1534092 MAZ TRANSFAC yes 1538982 4890 9151244
chr16 1534088 1534108 PPARG JASPAR yes 1538982 4874 9151245
chr16 1534090 1534100 SP1 JASPAR yes 1538982 4882 9151246
chr16 1534127 1534132 ETS2 TRANSFAC yes 1538982 4850 9151247
chr16 1534127 1534135 EHF JASPAR yes 1538982 4847 9151248
chr16 1534133 1534148 AR JASPAR yes 1538982 4834 9151249
chr16 1534133 1534148 STAT2 JASPAR yes 1538982 4834 9151250
chr16 1534144 1534148 H4TF2 TRANSFAC yes 1538982 4834 9151251
chr16 1534158 1534170 MYBL1 JASPAR yes 1538982 4812 9151252
chr16 1534163 1534166 MYB TRANSFAC yes 1538982 4816 9151253
chr16 1534167 1534173 YY1 JASPAR yes 1538982 4809 9151254
chr16 1534197 1534212 LEF1 JASPAR yes 1538982 4770 9151255
chr16 1534198 1534212 TCF7L2 JASPAR yes 1538982 4770 9151256
chr16 1534203 1534218 HNF4A JASPAR yes 1538982 4764 9151257
chr16 1534227 1534237 HOXC10 JASPAR yes 1538982 4745 9151258
chr16 1534227 1534237 HOXD11 JASPAR yes 1538982 4745 9151259
chr16 1534227 1534238 HOXA10 JASPAR yes 1538982 4744 9151260
chr16 1534227 1534238 HOXC11 JASPAR yes 1538982 4744 9151261
chr16 1534227 1534238 HOXC12 JASPAR yes 1538982 4744 9151262
chr16 1534227 1534238 HOXC13 JASPAR yes 1538982 4744 9151263
chr16 1534228 1534237 CDX1 JASPAR yes 1538982 4745 9151264
chr16 1534228 1534239 CDX2 JASPAR yes 1538982 4743 9151265
chr16 1534234 1534246 POU2F1 JASPAR yes 1538982 4736 9151266
chr16 1534234 1534247 POU3F3 JASPAR yes 1538982 4735 9151267
chr16 1534234 1534248 POU1F1 JASPAR yes 1538982 4734 9151268
chr16 1534235 1534247 POU3F1 JASPAR yes 1538982 4735 9151269
chr16 1534235 1534247 POU3F2 JASPAR yes 1538982 4735 9151270
chr16 1534235 1534248 POU2F2 JASPAR yes 1538982 4734 9151271
chr16 1534236 1534244 FOXL1 JASPAR yes 1538982 4738 9151272
chr16 1534236 1534245 POU3F4 JASPAR yes 1538982 4737 9151273
chr16 1534236 1534245 POU5F1B JASPAR yes 1538982 4737 9151274
chr16 1534236 1534247 FOXB1 JASPAR yes 1538982 4735 9151275
chr16 1534246 1534253 JUN TRANSFAC yes 1538982 4729 9151276
chr16 1534246 1534257 RUNX1 JASPAR yes 1538982 4725 9151277
chr16 1534253 1534273 RREB1 JASPAR yes 1538982 4709 9151278
chr16 1534258 1534270 IRF1 JASPAR yes 1538982 4712 9151279
chr16 1534258 1534278 RREB1 JASPAR yes 1538982 4704 9151280
chr16 1534259 1534280 IRF1 JASPAR yes 1538982 4702 9151281
chr16 1534260 1534266 TCF4 TRANSFAC yes 1538982 4716 9151282
chr16 1534260 1534275 FOXP1 JASPAR yes 1538982 4707 9151283
chr16 1534263 1534275 IRF1 JASPAR yes 1538982 4707 9151284
chr16 1534265 1534271 TCF4 TRANSFAC yes 1538982 4711 9151285
chr16 1534265 1534280 FOXP1 JASPAR yes 1538982 4702 9151286
chr16 1534266 1534281 STAT2 JASPAR yes 1538982 4701 9151287
chr16 1534268 1534280 IRF1 JASPAR yes 1538982 4702 9151288
chr16 1534270 1534276 TCF4 TRANSFAC yes 1538982 4706 9151289
chr16 1534270 1534285 FOXP1 JASPAR yes 1538982 4697 9151290
chr16 1534289 1534308 PAX5 JASPAR yes 1538982 4674 9151291
chr16 1534295 1534314 RFX2 JASPAR yes 1538982 4668 9151292
chr16 1534349 1534362 TFAP2B JASPAR yes 1538982 4620 9151293
chr16 1534372 1534380 TBX15 JASPAR yes 1538982 4602 9151294
chr16 1534417 1534425 TBX5 JASPAR yes 1538982 4557 9151295
chr16 1534417 1534426 ZEB1 JASPAR yes 1538982 4556 9151296
chr16 1534417 1534430 ZBTB18 JASPAR yes 1538982 4552 9151297
chr16 1534418 1534428 ID4 JASPAR yes 1538982 4554 9151298
chr16 1534418 1534428 TCF3 JASPAR yes 1538982 4554 9151299
chr16 1534418 1534428 TCF4 JASPAR yes 1538982 4554 9151300
chr16 1534420 1534425 USF2 TRANSFAC yes 1538982 4557 9151301
chr16 1534439 1534443 YY1 TRANSFAC yes 1538982 4539 9151302
chr16 1534448 1534455 POU2F1 TRANSFAC yes 1538982 4527 9151303
chr16 1534458 1534468 RELA JASPAR yes 1538982 4514 9151304
chr16 1534458 1534468 REL JASPAR yes 1538982 4514 9151305
chr16 1534458 1534469 NFKB1 JASPAR yes 1538982 4513 9151306
chr16 1534458 1534471 NFKB1 JASPAR yes 1538982 4511 9151307
chr16 1534458 1534471 NFKB2 JASPAR yes 1538982 4511 9151308
chr16 1534459 1534469 NFKB1 JASPAR yes 1538982 4513 9151309
chr16 1534459 1534469 RELA JASPAR yes 1538982 4513 9151310
chr16 1534459 1534470 NFKB1 JASPAR yes 1538982 4512 9151311
chr16 1534474 1534477 MYB TRANSFAC yes 1538982 4505 9151312
chr16 1534509 1534515 ZNF354C JASPAR yes 1538982 4467 9151313
SNPs associated with PTX4[ENSG00000251692.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 2054957 rs61136482 G A 515975 Esophagus 0.32015 4259753
chr16 610162 rs112749718 T G 925725 Breast 0.437234 4247197
chr16 1054797 rs148228142 G A 481090 Spleen 0.170684 4251338
chr16 873587 rs59554570 G A,C 662300 Adrenal 0.122715 4249749
Details of PTX4[ENSG00000251692.3]
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Genomic Location chr16:1535887-1538982[-]
TSS 1538982
Gene Name PTX4
Ensembl ID ENSG00000251692.3
ENTREZID 390667
Uniprot
Q96A99
Protein Name
Pentraxin-4
Expression levels of PTX4[ENSG00000251692.3]
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