EnhancerDB
  1. Home
  2. Enhancers
  3. vista1020[chr1:29563709-29564430]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1020[chr1:29563709-29564430]
Back to top
Tissue distribution of vista1020
Back to top
Transcription factor that possibly regulate vista1020[chr1:29563709-29564430]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802678
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802679
chr1 29563719 29563725 ZNF354C JASPAR yes 27808087
chr1 29563719 29563725 ZNF354C JASPAR yes 118263822
chr1 29563720 29563731 SPDEF JASPAR yes 27808088
chr1 29563720 29563731 SPDEF JASPAR yes 118263823
chr1 29563768 29563778 TBX21 JASPAR yes 27808089
chr1 29563768 29563778 TBX21 JASPAR yes 118263824
chr1 29563769 29563779 TBR1 JASPAR yes 27808090
chr1 29563769 29563779 TBR1 JASPAR yes 118263825
chr1 29563790 29563794 H4TF2 TRANSFAC yes 27808091
chr1 29563790 29563794 H4TF2 TRANSFAC yes 118263826
chr1 29563826 29563831 TFAP2A TRANSFAC yes 27808092
chr1 29563826 29563831 TFAP2A TRANSFAC yes 118263827
chr1 29563826 29563832 MZF1 JASPAR yes 27808093
chr1 29563826 29563832 MZF1 JASPAR yes 118263828
chr1 29563830 29563844 PLAG1 JASPAR yes 27808094
chr1 29563830 29563844 PLAG1 JASPAR yes 118263829
chr1 29563838 29563853 RUNX2 JASPAR yes 27808095
chr1 29563838 29563853 RUNX2 JASPAR yes 118263830
chr1 29563857 29563866 TFAP2A JASPAR yes 27808096
chr1 29563857 29563866 TFAP2A JASPAR yes 118263831
chr1 29563861 29563866 SP1 TRANSFAC yes 27808097
chr1 29563861 29563866 SP1 TRANSFAC yes 118263832
chr1 29563872 29563876 H4TF2 TRANSFAC yes 27808098
chr1 29563872 29563876 H4TF2 TRANSFAC yes 118263833
chr1 29563882 29563892 NFIA JASPAR yes 27808099
chr1 29563882 29563892 NFIA JASPAR yes 118263834
chr1 29563884 29563890 NFIC JASPAR yes 27808100
chr1 29563884 29563890 NFIC JASPAR yes 118263835
chr1 29563892 29563903 STAT1 JASPAR yes 27808101
chr1 29563892 29563903 STAT3 JASPAR yes 27808102
chr1 29563892 29563903 STAT1 JASPAR yes 118263836
chr1 29563892 29563903 STAT3 JASPAR yes 118263837
chr1 29563925 29563935 ERG JASPAR yes 27808103
chr1 29563925 29563935 ETV3 JASPAR yes 27808104
chr1 29563925 29563935 ETV4 JASPAR yes 27808105
chr1 29563925 29563935 ETV5 JASPAR yes 27808106
chr1 29563925 29563935 FEV JASPAR yes 27808107
chr1 29563925 29563935 ERG JASPAR yes 118263838
chr1 29563925 29563935 ETV3 JASPAR yes 118263839
chr1 29563925 29563935 ETV4 JASPAR yes 118263840
chr1 29563925 29563935 ETV5 JASPAR yes 118263841
chr1 29563925 29563935 FEV JASPAR yes 118263842
chr1 29563974 29563984 TEAD1 JASPAR yes 27808108
chr1 29563974 29563984 TEAD4 JASPAR yes 27808109
chr1 29563974 29563984 TEAD1 JASPAR yes 118263843
chr1 29563974 29563984 TEAD4 JASPAR yes 118263844
chr1 29563975 29563983 TEAD3 JASPAR yes 27808110
chr1 29563975 29563983 TEAD3 JASPAR yes 118263845
chr1 29563996 29564007 NRF1 JASPAR yes 27808111
chr1 29563996 29564007 NRF1 JASPAR yes 118263846
chr1 29564006 29564018 NHLH1 JASPAR yes 27808112
chr1 29564006 29564018 NHLH1 JASPAR yes 118263847
chr1 29564022 29564041 REST JASPAR yes 27808113
chr1 29564022 29564041 REST JASPAR yes 118263848
chr1 29564027 29564031 H4TF2 TRANSFAC yes 27808114
chr1 29564027 29564031 H4TF2 TRANSFAC yes 118263849
chr1 29564033 29564038 SP1 TRANSFAC yes 27808115
chr1 29564033 29564038 SP1 TRANSFAC yes 118263850
chr1 29564035 29564043 SMAD4 TRANSFAC yes 27808116
chr1 29564035 29564043 SMAD4 TRANSFAC yes 118263851
chr1 29564037 29564042 SP1 TRANSFAC yes 27808117
chr1 29564037 29564042 SP1 TRANSFAC yes 118263852
chr1 29564038 29564050 TFAP2A JASPAR yes 27808118
chr1 29564038 29564050 TFAP2B JASPAR yes 27808119
chr1 29564038 29564050 TFAP2C JASPAR yes 27808120
chr1 29564038 29564050 TFAP2A JASPAR yes 118263853
chr1 29564038 29564050 TFAP2B JASPAR yes 118263854
chr1 29564038 29564050 TFAP2C JASPAR yes 118263855
chr1 29564038 29564051 TFAP2B JASPAR yes 27808121
chr1 29564038 29564051 TFAP2C JASPAR yes 27808122
chr1 29564038 29564051 TFAP2B JASPAR yes 118263856
chr1 29564038 29564051 TFAP2C JASPAR yes 118263857
chr1 29564039 29564048 TFAP2A JASPAR yes 27808123
chr1 29564039 29564048 TFAP2A JASPAR yes 118263858
chr1 29564045 29564052 SP1 TRANSFAC yes 27808124
chr1 29564045 29564052 SP1 TRANSFAC yes 118263859
chr1 29564047 29564052 SP1 TRANSFAC yes 27808125
chr1 29564047 29564052 SP1 TRANSFAC yes 118263860
chr1 29564070 29564081 NRF1 JASPAR yes 27808126
chr1 29564070 29564081 NRF1 JASPAR yes 118263861
chr1 29564078 29564089 NRF1 JASPAR yes 27808127
chr1 29564078 29564089 NRF1 JASPAR yes 118263862
chr1 29564120 29564131 NRF1 JASPAR yes 27808128
chr1 29564120 29564131 NRF1 JASPAR yes 118263863
chr1 29564127 29564140 TFAP2A JASPAR yes 27808129
chr1 29564127 29564140 TFAP2B JASPAR yes 27808130
chr1 29564127 29564140 TFAP2C JASPAR yes 27808131
chr1 29564127 29564140 TFAP2A JASPAR yes 118263864
chr1 29564127 29564140 TFAP2B JASPAR yes 118263865
chr1 29564127 29564140 TFAP2C JASPAR yes 118263866
chr1 29564128 29564139 EBF1 JASPAR yes 27808132
chr1 29564128 29564139 EBF1 JASPAR yes 118263867
chr1 29564149 29564153 LFA1 TRANSFAC yes 27808133
chr1 29564149 29564153 LFA1 TRANSFAC yes 118263868
chr1 29564152 29564167 TFAP2C JASPAR yes 27808134
chr1 29564152 29564167 TFAP2C JASPAR yes 118263869
chr1 29564154 29564169 TFAP2A JASPAR yes 27808135
chr1 29564154 29564169 TFAP2A JASPAR yes 118263870
chr1 29564155 29564166 TFAP2A JASPAR yes 27808136
chr1 29564155 29564166 TFAP2B JASPAR yes 27808137
chr1 29564155 29564166 TFAP2C JASPAR yes 27808138
chr1 29564155 29564166 TFAP2A JASPAR yes 118263871
chr1 29564155 29564166 TFAP2B JASPAR yes 118263872
chr1 29564155 29564166 TFAP2C JASPAR yes 118263873
chr1 29564156 29564165 TFAP2A JASPAR yes 27808139
chr1 29564156 29564165 TFAP2A JASPAR yes 118263874
chr1 29564160 29564174 PLAG1 JASPAR yes 27808140
chr1 29564160 29564174 PLAG1 JASPAR yes 118263875
chr1 29564163 29564174 EBF1 JASPAR yes 27808141
chr1 29564163 29564174 EBF1 JASPAR yes 118263876
chr1 29564181 29564190 TFAP2A JASPAR yes 27808142
chr1 29564181 29564190 TFAP2A JASPAR yes 118263877
chr1 29564193 29564204 TFAP2A JASPAR yes 27808143
chr1 29564193 29564204 TFAP2B JASPAR yes 27808144
chr1 29564193 29564204 TFAP2C JASPAR yes 27808145
chr1 29564193 29564204 TFAP2A JASPAR yes 118263878
chr1 29564193 29564204 TFAP2B JASPAR yes 118263879
chr1 29564193 29564204 TFAP2C JASPAR yes 118263880
chr1 29564194 29564203 TFAP2A JASPAR yes 27808146
chr1 29564194 29564203 TFAP2A JASPAR yes 118263881
chr1 29564199 29564203 LFA1 TRANSFAC yes 27808147
chr1 29564199 29564203 LFA1 TRANSFAC yes 118263882
chr1 29564209 29564221 FOXI1 JASPAR yes 27808148
chr1 29564209 29564221 FOXI1 JASPAR yes 118263883
chr1 29564220 29564230 CEBPB JASPAR yes 27808149
chr1 29564220 29564230 CEBPD JASPAR yes 27808150
chr1 29564220 29564230 CEBPE JASPAR yes 27808151
chr1 29564220 29564230 CEBPB JASPAR yes 118263884
chr1 29564220 29564230 CEBPD JASPAR yes 118263885
chr1 29564220 29564230 CEBPE JASPAR yes 118263886
chr1 29564230 29564237 E2F1 TRANSFAC yes 27808152
chr1 29564230 29564237 E2F1 TRANSFAC yes 118263887
chr1 29564244 29564249 SP1 TRANSFAC yes 27808153
chr1 29564244 29564249 SP1 TRANSFAC yes 118263888
chr1 29564247 29564252 SP1 TRANSFAC yes 27808154
chr1 29564247 29564252 SP1 TRANSFAC yes 118263889
chr1 29564261 29564266 SP1 TRANSFAC yes 27808155
chr1 29564261 29564266 SP1 TRANSFAC yes 118263890
chr1 29564272 29564287 ZIC4 JASPAR yes 27808156
chr1 29564272 29564287 ZIC4 JASPAR yes 118263891
chr1 29564283 29564303 ESR1 JASPAR yes 27808157
chr1 29564283 29564303 ESR1 JASPAR yes 118263892
chr1 29564300 29564314 ZIC1 JASPAR yes 27808158
chr1 29564300 29564314 ZIC1 JASPAR yes 118263893
chr1 29564308 29564313 SP1 TRANSFAC yes 27808159
chr1 29564308 29564313 SP1 TRANSFAC yes 118263894
chr1 29564308 29564315 SP1 TRANSFAC yes 27808160
chr1 29564308 29564315 SP1 TRANSFAC yes 118263895
chr1 29564314 29564319 SP1 TRANSFAC yes 27808161
chr1 29564314 29564319 SP1 TRANSFAC yes 118263896
chr1 29564317 29564322 SP1 TRANSFAC yes 27808162
chr1 29564317 29564322 SP1 TRANSFAC yes 118263897
chr1 29564318 29564323 SP1 TRANSFAC yes 27808163
chr1 29564318 29564323 SP1 TRANSFAC yes 118263898
chr1 29564318 29564327 THAP1 JASPAR yes 27808164
chr1 29564318 29564327 THAP1 JASPAR yes 118263899
chr1 29564321 29564325 LFA1 TRANSFAC yes 27808165
chr1 29564321 29564325 LFA1 TRANSFAC yes 118263900
chr1 29564327 29564333 MAZ TRANSFAC yes 27808166
chr1 29564327 29564333 MAZ TRANSFAC yes 118263901
chr1 29564341 29564346 SP1 TRANSFAC yes 27808167
chr1 29564341 29564346 SP1 TRANSFAC yes 118263902
chr1 29564354 29564369 RFX5 JASPAR yes 27808168
chr1 29564354 29564369 RFX5 JASPAR yes 118263903
chr1 29564366 29564378 NHLH1 JASPAR yes 27808169
chr1 29564366 29564378 NHLH1 JASPAR yes 118263904
chr1 29564368 29564379 NRF1 JASPAR yes 27808170
chr1 29564368 29564379 NRF1 JASPAR yes 118263905
chr1 29564374 29564389 ZIC4 JASPAR yes 27808171
chr1 29564374 29564389 ZIC4 JASPAR yes 118263906
chr1 29564375 29564386 TFAP2A JASPAR yes 27808172
chr1 29564375 29564386 TFAP2B JASPAR yes 27808173
chr1 29564375 29564386 TFAP2C JASPAR yes 27808174
chr1 29564375 29564386 TFAP2A JASPAR yes 118263907
chr1 29564375 29564386 TFAP2B JASPAR yes 118263908
chr1 29564375 29564386 TFAP2C JASPAR yes 118263909
chr1 29564375 29564389 ZIC1 JASPAR yes 27808175
chr1 29564375 29564389 ZIC1 JASPAR yes 118263910
chr1 29564376 29564385 TFAP2A JASPAR yes 27808176
chr1 29564376 29564385 TFAP2A JASPAR yes 118263911
chr1 29564381 29564386 SP1 TRANSFAC yes 27808177
chr1 29564381 29564386 SP1 TRANSFAC yes 118263912
chr1 29564389 29564394 SP1 TRANSFAC yes 27808178
chr1 29564389 29564394 SP1 TRANSFAC yes 118263913
chr1 29564390 29564395 SP1 TRANSFAC yes 27808179
chr1 29564390 29564395 SP1 TRANSFAC yes 118263914
chr1 29564390 29564396 SP1 TRANSFAC yes 27808180
chr1 29564390 29564396 SP1 TRANSFAC yes 118263915
chr1 29564393 29564406 NFKB2 JASPAR yes 27808181
chr1 29564393 29564406 NFKB2 JASPAR yes 118263916
chr1 29564394 29564404 NFKB1 JASPAR yes 27808182
chr1 29564394 29564404 NFKB1 JASPAR yes 118263917
chr1 29564394 29564405 NFKB1 JASPAR yes 27808183
chr1 29564394 29564405 NFKB1 JASPAR yes 118263918
chr1 29564398 29564402 NFE TRANSFAC yes 27808184
chr1 29564398 29564402 NFE TRANSFAC yes 118263919
chr1 29564417 29564429 HINFP JASPAR yes 27808185
chr1 29564417 29564429 HINFP JASPAR yes 118263920
SNP sites on vista1020[chr1:29563709-29564430]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 29563723 rs577272658 G A
EZH2 SPDEF ZNF354C
196316
chr1 29563887 rs557209789 C T
EZH2 NFIA NFIC
196317
Genes possibly regulated by vista1020[chr1:29563709-29564430]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29474255 29508499 - SRSF4 ENSG00000116350.11 29508499 0.57 0.99 422 44790
chr1 29519385 29557454 - MECR ENSG00000116353.11 29557454 0.78 1.0 423 93745
chr1 29563028 29653325 + PTPRU ENSG00000060656.15 29563028 0.73 1.0 424 99319
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1020[chr1:29563709-29564430]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results