EnhancerDB
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  3. rs557209789[chr1:29563887]
Enhancers that have rs557209789[chr1:29563887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29562585 29578758 enh11690
Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr1 29563709 29564430 vista1020
VISTA
Transcript factors that have rs557209789[chr1:29563887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29563065 29563975 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802677
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802678
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802679
chr1 29563882 29563892 NFIA JASPAR yes 27808099
chr1 29563882 29563892 NFIA JASPAR yes 118263834
chr1 29563884 29563890 NFIC JASPAR yes 27808100
chr1 29563884 29563890 NFIC JASPAR yes 118263835
Genes associated with rs557209789[chr1:29563887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More