EnhancerDB
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  3. rs577272658[chr1:29563723]
Enhancers that have rs577272658[chr1:29563723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29562585 29578758 enh11690
Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr1 29563709 29564430 vista1020
VISTA
Transcript factors that have rs577272658[chr1:29563723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29563065 29563975 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802677
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802678
chr1 29563065 29565563 EZH2 UCSC Txn Factor no Conserved 107802679
chr1 29563719 29563725 ZNF354C JASPAR yes 27808087
chr1 29563719 29563725 ZNF354C JASPAR yes 118263822
chr1 29563720 29563731 SPDEF JASPAR yes 27808088
chr1 29563720 29563731 SPDEF JASPAR yes 118263823
Genes associated with rs577272658[chr1:29563723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More