EnhancerDB
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  3. vista1339[chr1:42126621-42126978]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1339[chr1:42126621-42126978]
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Tissue distribution of vista1339
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Transcription factor that possibly regulate vista1339[chr1:42126621-42126978]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42126612 42126622 HOXC10 JASPAR yes 28406574
chr1 42126612 42126622 HOXD11 JASPAR yes 28406575
chr1 42126612 42126622 HOXC10 JASPAR yes 118279066
chr1 42126612 42126622 HOXD11 JASPAR yes 118279067
chr1 42126612 42126623 HOXC11 JASPAR yes 28406576
chr1 42126612 42126623 HOXD12 JASPAR yes 28406577
chr1 42126612 42126623 HOXC11 JASPAR yes 118279068
chr1 42126612 42126623 HOXD12 JASPAR yes 118279069
chr1 42126613 42126623 EMX1 JASPAR yes 28406578
chr1 42126613 42126623 MEOX2 JASPAR yes 28406579
chr1 42126613 42126623 EMX1 JASPAR yes 118279070
chr1 42126613 42126623 MEOX2 JASPAR yes 118279071
chr1 42126614 42126622 NKX6-1 JASPAR yes 28406580
chr1 42126614 42126622 NKX6-1 JASPAR yes 118279072
chr1 42126633 42126646 ATF4 JASPAR yes 28406581
chr1 42126633 42126646 ATF4 JASPAR yes 118279073
chr1 42126635 42126656 IRF1 JASPAR yes 28406582
chr1 42126635 42126656 IRF1 JASPAR yes 118279074
chr1 42126670 42126686 RFX4 JASPAR yes 28406583
chr1 42126670 42126686 RFX4 JASPAR yes 118279075
chr1 42126671 42126690 RFX2 JASPAR yes 28406584
chr1 42126671 42126690 RFX2 JASPAR yes 118279076
chr1 42126704 42126719 RUNX2 JASPAR yes 28406585
chr1 42126704 42126719 RUNX2 JASPAR yes 118279077
chr1 42126705 42126714 RUNX2 JASPAR yes 28406586
chr1 42126705 42126714 RUNX2 JASPAR yes 118279078
chr1 42126705 42126715 RUNX3 JASPAR yes 28406587
chr1 42126705 42126715 RUNX3 JASPAR yes 118279079
chr1 42126705 42126716 RUNX1 JASPAR yes 28406588
chr1 42126705 42126716 RUNX1 JASPAR yes 118279080
chr1 42126718 42126730 HES5 JASPAR yes 28406589
chr1 42126718 42126730 HES7 JASPAR yes 28406590
chr1 42126718 42126730 HES5 JASPAR yes 118279081
chr1 42126718 42126730 HES7 JASPAR yes 118279082
chr1 42126719 42126729 BHLHE40 JASPAR yes 28406591
chr1 42126719 42126729 BHLHE41 JASPAR yes 28406592
chr1 42126719 42126729 HEY1 JASPAR yes 28406593
chr1 42126719 42126729 HEY2 JASPAR yes 28406594
chr1 42126719 42126729 MNT JASPAR yes 28406595
chr1 42126719 42126729 BHLHE40 JASPAR yes 118279083
chr1 42126719 42126729 BHLHE41 JASPAR yes 118279084
chr1 42126719 42126729 HEY1 JASPAR yes 118279085
chr1 42126719 42126729 HEY2 JASPAR yes 118279086
chr1 42126719 42126729 MNT JASPAR yes 118279087
chr1 42126721 42126726 MYC TRANSFAC yes 28406596
chr1 42126721 42126726 USF1 TRANSFAC yes 28406597
chr1 42126721 42126726 USF2 TRANSFAC yes 28406598
chr1 42126721 42126726 MYC TRANSFAC yes 118279088
chr1 42126721 42126726 USF1 TRANSFAC yes 118279089
chr1 42126721 42126726 USF2 TRANSFAC yes 118279090
chr1 42126745 42126763 NR3C1 JASPAR yes 28406599
chr1 42126745 42126763 NR3C1 JASPAR yes 118279091
chr1 42126750 42126754 YY1 TRANSFAC yes 28406600
chr1 42126750 42126754 YY1 TRANSFAC yes 118279092
chr1 42126750 42126765 FOXP1 JASPAR yes 28406601
chr1 42126750 42126765 FOXP1 JASPAR yes 118279093
chr1 42126756 42126763 NKX3-1 JASPAR yes 28406602
chr1 42126756 42126763 NKX3-1 JASPAR yes 118279094
chr1 42126791 42126802 EBF1 JASPAR yes 28406603
chr1 42126791 42126802 EBF1 JASPAR yes 118279095
chr1 42126795 42126800 TFAP2A TRANSFAC yes 28406604
chr1 42126795 42126800 TFAP2A TRANSFAC yes 118279096
chr1 42126795 42126801 MZF1 JASPAR yes 28406605
chr1 42126795 42126801 MZF1 JASPAR yes 118279097
chr1 42126806 42126824 SRF JASPAR yes 28406606
chr1 42126806 42126824 SRF JASPAR yes 118279098
chr1 42126807 42126822 MEF2C JASPAR yes 28406607
chr1 42126807 42126822 MEF2C JASPAR yes 118279099
chr1 42126807 42126823 POU4F3 JASPAR yes 28406608
chr1 42126807 42126823 POU4F3 JASPAR yes 118279100
chr1 42126810 42126814 YY1 TRANSFAC yes 28406609
chr1 42126810 42126814 YY1 TRANSFAC yes 118279101
chr1 42126849 42126858 THAP1 JASPAR yes 28406610
chr1 42126849 42126858 THAP1 JASPAR yes 118279102
chr1 42126867 42126872 GATA2 JASPAR yes 28406611
chr1 42126867 42126872 GATA2 JASPAR yes 118279103
chr1 42126887 42126901 IRF8 JASPAR yes 28406612
chr1 42126887 42126901 IRF8 JASPAR yes 118279104
chr1 42126888 42126892 NFE TRANSFAC yes 28406613
chr1 42126888 42126892 NFE TRANSFAC yes 118279105
chr1 42126902 42126913 ESRRA JASPAR yes 28406614
chr1 42126902 42126913 ESRRB JASPAR yes 28406615
chr1 42126902 42126913 ESRRA JASPAR yes 118279106
chr1 42126902 42126913 ESRRB JASPAR yes 118279107
chr1 42126917 42126929 PBX1 JASPAR yes 28406616
chr1 42126917 42126929 PBX1 JASPAR yes 118279108
chr1 42126918 42126932 ONECUT1 JASPAR yes 28406617
chr1 42126918 42126932 ONECUT2 JASPAR yes 28406618
chr1 42126918 42126932 ONECUT3 JASPAR yes 28406619
chr1 42126918 42126932 ONECUT1 JASPAR yes 118279109
chr1 42126918 42126932 ONECUT2 JASPAR yes 118279110
chr1 42126918 42126932 ONECUT3 JASPAR yes 118279111
chr1 42126921 42126931 CUX1 JASPAR yes 28406620
chr1 42126921 42126931 CUX1 JASPAR yes 118279112
chr1 42126930 42126934 YY1 TRANSFAC yes 28406621
chr1 42126930 42126934 YY1 TRANSFAC yes 118279113
chr1 42126931 42126946 MEF2A JASPAR yes 28406622
chr1 42126931 42126946 MEF2A JASPAR yes 118279114
chr1 42126933 42126945 MEF2A JASPAR yes 28406623
chr1 42126933 42126945 MEF2A JASPAR yes 118279115
chr1 42126934 42126945 FOXC1 JASPAR yes 28406624
chr1 42126934 42126945 FOXC1 JASPAR yes 118279116
chr1 42126935 42126939 YY1 TRANSFAC yes 28406625
chr1 42126935 42126939 YY1 TRANSFAC yes 118279117
chr1 42126941 42126955 FOXF2 JASPAR yes 28406626
chr1 42126941 42126955 FOXF2 JASPAR yes 118279118
chr1 42126941 42126956 FOXP1 JASPAR yes 28406627
chr1 42126941 42126956 FOXP1 JASPAR yes 118279119
chr1 42126943 42126954 FOXC1 JASPAR yes 28406628
chr1 42126943 42126954 FOXC1 JASPAR yes 118279120
chr1 42126943 42126955 FOXC2 JASPAR yes 28406629
chr1 42126943 42126955 FOXC2 JASPAR yes 118279121
chr1 42126944 42126952 GATA3 JASPAR yes 28406630
chr1 42126944 42126952 GATA3 JASPAR yes 118279122
chr1 42126944 42126955 FOXP2 JASPAR yes 28406631
chr1 42126944 42126955 FOXP2 JASPAR yes 118279123
chr1 42126944 42126956 FOXI1 JASPAR yes 28406632
chr1 42126944 42126956 FOXI1 JASPAR yes 118279124
chr1 42126946 42126954 FOXG1 JASPAR yes 28406633
chr1 42126946 42126954 FOXO3 JASPAR yes 28406634
chr1 42126946 42126954 FOXG1 JASPAR yes 118279125
chr1 42126946 42126954 FOXO3 JASPAR yes 118279126
chr1 42126949 42126959 MYF6 JASPAR yes 28406635
chr1 42126949 42126959 MYF6 JASPAR yes 118279127
SNP sites on vista1339[chr1:42126621-42126978]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42126647 rs552429421 GA G
IRF1
263514
chr1 42126813 rs368130879 T C
MEF2C POU4F3 SRF YY1
263515
Genes possibly regulated by vista1339[chr1:42126621-42126978]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1339[chr1:42126621-42126978]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results