EnhancerDB
  1. Home
  2. SNP
  3. rs368130879[chr1:42126813]
Enhancers that have rs368130879[chr1:42126813]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr1 42126621 42126978 vista1339
VISTA
Transcript factors that have rs368130879[chr1:42126813]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42126572 42126902 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21325359
chr1 42126572 42126902 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802963
chr1 42126806 42126824 SRF JASPAR yes 28406606
chr1 42126806 42126824 SRF JASPAR yes 118279098
chr1 42126807 42126822 MEF2C JASPAR yes 28406607
chr1 42126807 42126822 MEF2C JASPAR yes 118279099
chr1 42126807 42126823 POU4F3 JASPAR yes 28406608
chr1 42126807 42126823 POU4F3 JASPAR yes 118279100
chr1 42126810 42126814 YY1 TRANSFAC yes 28406609
chr1 42126810 42126814 YY1 TRANSFAC yes 118279101
Genes associated with rs368130879[chr1:42126813], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More