EnhancerDB
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  3. vista1360[chr1:42275404-42275646]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1360[chr1:42275404-42275646]
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Tissue distribution of vista1360
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Transcription factor that possibly regulate vista1360[chr1:42275404-42275646]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42275438 42275453 FOXP1 JASPAR yes 28425335
chr1 42275438 42275453 FOXP1 JASPAR yes 118280267
chr1 42275439 42275450 FOXA1 JASPAR yes 28425336
chr1 42275439 42275450 FOXA1 JASPAR yes 118280268
chr1 42275439 42275454 FOXA1 JASPAR yes 28425337
chr1 42275439 42275454 FOXA1 JASPAR yes 118280269
chr1 42275440 42275452 FOXC2 JASPAR yes 28425338
chr1 42275440 42275452 FOXC2 JASPAR yes 118280270
chr1 42275441 42275452 FOXP2 JASPAR yes 28425339
chr1 42275441 42275452 FOXP2 JASPAR yes 118280271
chr1 42275443 42275450 FOXD2 JASPAR yes 28425340
chr1 42275443 42275450 FOXI1 JASPAR yes 28425341
chr1 42275443 42275450 FOXL1 JASPAR yes 28425342
chr1 42275443 42275450 FOXO4 JASPAR yes 28425343
chr1 42275443 42275450 FOXO6 JASPAR yes 28425344
chr1 42275443 42275450 FOXP3 JASPAR yes 28425345
chr1 42275443 42275450 FOXD2 JASPAR yes 118280272
chr1 42275443 42275450 FOXI1 JASPAR yes 118280273
chr1 42275443 42275450 FOXL1 JASPAR yes 118280274
chr1 42275443 42275450 FOXO4 JASPAR yes 118280275
chr1 42275443 42275450 FOXO6 JASPAR yes 118280276
chr1 42275443 42275450 FOXP3 JASPAR yes 118280277
chr1 42275443 42275451 FOXD1 JASPAR yes 28425346
chr1 42275443 42275451 FOXG1 JASPAR yes 28425347
chr1 42275443 42275451 FOXO3 JASPAR yes 28425348
chr1 42275443 42275451 FOXD1 JASPAR yes 118280278
chr1 42275443 42275451 FOXG1 JASPAR yes 118280279
chr1 42275443 42275451 FOXO3 JASPAR yes 118280280
chr1 42275445 42275451 HiNF-A TRANSFAC yes 28425349
chr1 42275445 42275451 HiNF-A TRANSFAC yes 118280281
chr1 42275445 42275455 MAX JASPAR yes 28425350
chr1 42275445 42275455 MAX JASPAR yes 118280282
chr1 42275452 42275457 TFAP2A TRANSFAC yes 28425351
chr1 42275452 42275457 TFAP2A TRANSFAC yes 118280283
chr1 42275452 42275458 MZF1 JASPAR yes 28425352
chr1 42275452 42275458 MZF1 JASPAR yes 118280284
chr1 42275452 42275473 ZNF263 JASPAR yes 28425353
chr1 42275452 42275473 ZNF263 JASPAR yes 118280285
chr1 42275457 42275472 PRDM1 JASPAR yes 28425354
chr1 42275457 42275472 PRDM1 JASPAR yes 118280286
chr1 42275469 42275490 ZNF263 JASPAR yes 28425355
chr1 42275469 42275490 ZNF263 JASPAR yes 118280287
chr1 42275470 42275477 CEBPA TRANSFAC yes 28425356
chr1 42275470 42275477 CEBPA TRANSFAC yes 118280288
chr1 42275479 42275493 TCF7L2 JASPAR yes 28425357
chr1 42275479 42275493 TCF7L2 JASPAR yes 118280289
chr1 42275479 42275494 LEF1 JASPAR yes 28425358
chr1 42275479 42275494 LEF1 JASPAR yes 118280290
chr1 42275480 42275501 IRF1 JASPAR yes 28425359
chr1 42275480 42275501 IRF1 JASPAR yes 118280291
chr1 42275482 42275503 ZNF263 JASPAR yes 28425360
chr1 42275482 42275503 ZNF263 JASPAR yes 118280292
chr1 42275483 42275489 TCF4 TRANSFAC yes 28425361
chr1 42275483 42275489 TCF4 TRANSFAC yes 118280293
chr1 42275484 42275499 PRDM1 JASPAR yes 28425362
chr1 42275484 42275499 PRDM1 JASPAR yes 118280294
chr1 42275486 42275507 IRF1 JASPAR yes 28425363
chr1 42275486 42275507 IRF1 JASPAR yes 118280295
chr1 42275490 42275504 SPI1 JASPAR yes 28425364
chr1 42275490 42275504 SPIC JASPAR yes 28425365
chr1 42275490 42275504 SPI1 JASPAR yes 118280296
chr1 42275490 42275504 SPIC JASPAR yes 118280297
chr1 42275496 42275501 ETS2 TRANSFAC yes 28425366
chr1 42275496 42275501 ETS2 TRANSFAC yes 118280298
chr1 42275496 42275507 NFKB1 JASPAR yes 28425367
chr1 42275496 42275507 NFKB1 JASPAR yes 118280299
chr1 42275497 42275507 NFKB1 JASPAR yes 28425368
chr1 42275497 42275507 NFKB1 JASPAR yes 118280300
chr1 42275498 42275518 PPARG JASPAR yes 28425369
chr1 42275498 42275518 PPARG JASPAR yes 118280301
chr1 42275501 42275505 H4TF2 TRANSFAC yes 28425370
chr1 42275501 42275505 H4TF2 TRANSFAC yes 118280302
chr1 42275513 42275531 MAFF JASPAR yes 28425371
chr1 42275513 42275531 MAFF JASPAR yes 118280303
chr1 42275515 42275526 NRL JASPAR yes 28425372
chr1 42275515 42275526 NRL JASPAR yes 118280304
chr1 42275515 42275530 MAFK JASPAR yes 28425373
chr1 42275515 42275530 MAFK JASPAR yes 118280305
chr1 42275519 42275533 BATF3 JASPAR yes 28425374
chr1 42275519 42275533 BATF3 JASPAR yes 118280306
chr1 42275520 42275532 JDP2 JASPAR yes 28425375
chr1 42275520 42275532 JDP2 JASPAR yes 118280307
chr1 42275520 42275535 JUND JASPAR yes 28425376
chr1 42275520 42275535 JUND JASPAR yes 118280308
chr1 42275521 42275534 JUN JASPAR yes 28425377
chr1 42275521 42275534 JUN JASPAR yes 118280309
chr1 42275522 42275529 JUN TRANSFAC yes 28425378
chr1 42275522 42275529 JUN TRANSFAC yes 118280310
chr1 42275542 42275559 PAX1 JASPAR yes 28425379
chr1 42275542 42275559 PAX9 JASPAR yes 28425380
chr1 42275542 42275559 PAX1 JASPAR yes 118280311
chr1 42275542 42275559 PAX9 JASPAR yes 118280312
chr1 42275543 42275557 PAX6 JASPAR yes 28425381
chr1 42275543 42275557 PAX6 JASPAR yes 118280313
chr1 42275543 42275562 PAX5 JASPAR yes 28425382
chr1 42275543 42275562 PAX5 JASPAR yes 118280314
chr1 42275555 42275560 TFAP2A TRANSFAC yes 28425383
chr1 42275555 42275560 TFAP2A TRANSFAC yes 118280315
chr1 42275555 42275561 MZF1 JASPAR yes 28425384
chr1 42275555 42275561 MZF1 JASPAR yes 118280316
chr1 42275557 42275566 NF-kappaB TRANSFAC yes 28425385
chr1 42275557 42275566 NF-kappaB TRANSFAC yes 118280317
chr1 42275557 42275567 NFKB1 JASPAR yes 28425386
chr1 42275557 42275567 RELA JASPAR yes 28425387
chr1 42275557 42275567 REL JASPAR yes 28425388
chr1 42275557 42275567 NFKB1 JASPAR yes 118280318
chr1 42275557 42275567 RELA JASPAR yes 118280319
chr1 42275557 42275567 REL JASPAR yes 118280320
chr1 42275557 42275568 NFKB1 JASPAR yes 28425389
chr1 42275557 42275568 NFKB1 JASPAR yes 118280321
chr1 42275571 42275583 MEF2B JASPAR yes 28425390
chr1 42275571 42275583 MEF2B JASPAR yes 118280322
chr1 42275573 42275577 TEAD2 TRANSFAC yes 28425391
chr1 42275573 42275577 TEAD2 TRANSFAC yes 118280323
chr1 42275573 42275578 TBP TRANSFAC yes 28425392
chr1 42275573 42275578 TBP TRANSFAC yes 118280324
chr1 42275573 42275579 TMF TRANSFAC yes 28425393
chr1 42275573 42275579 TMF TRANSFAC yes 118280325
chr1 42275588 42275599 NFE2 JASPAR yes 28425394
chr1 42275588 42275599 NFE2 JASPAR yes 118280326
chr1 42275589 42275598 JDP2 JASPAR yes 28425395
chr1 42275589 42275598 JDP2 JASPAR yes 118280327
chr1 42275611 42275616 GATA2 JASPAR yes 28425396
chr1 42275611 42275616 GATA2 JASPAR yes 118280328
SNP sites on vista1360[chr1:42275404-42275646]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42275445 rs574268848 T A,G
FOXA1 FOXC2 FOXD1 FOXD2 FOXG1 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP1 FOXP2 FOXP3 HiNF-A MAX
265050
chr1 42275499 rs78725517 G A
ETS2 IRF1 NFKB1 PPARG PRDM1 SPI1 SPIC ZNF263
265051
chr1 42275551 rs78791344 T G
PAX1 PAX5 PAX6 PAX9
265052
chr1 42275612 rs535648274 T C
GATA2
265053
chr1 42275620 rs549487151 C T no 265054
Genes possibly regulated by vista1360[chr1:42275404-42275646]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1360[chr1:42275404-42275646]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results