EnhancerDB
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  3. rs78791344[chr1:42275551]
Enhancers that have rs78791344[chr1:42275551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42263485 42281915 enh292
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Heart
chr1 42275404 42275646 vista1360
VISTA
Transcript factors that have rs78791344[chr1:42275551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42275301 42275897 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802982
chr1 42275542 42275559 PAX1 JASPAR yes 28425379
chr1 42275542 42275559 PAX9 JASPAR yes 28425380
chr1 42275542 42275559 PAX1 JASPAR yes 118280311
chr1 42275542 42275559 PAX9 JASPAR yes 118280312
chr1 42275543 42275557 PAX6 JASPAR yes 28425381
chr1 42275543 42275557 PAX6 JASPAR yes 118280313
chr1 42275543 42275562 PAX5 JASPAR yes 28425382
chr1 42275543 42275562 PAX5 JASPAR yes 118280314
Genes associated with rs78791344[chr1:42275551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More