EnhancerDB
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  3. vista1366[chr1:42354251-42354647]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1366[chr1:42354251-42354647]
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Tissue distribution of vista1366
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Transcription factor that possibly regulate vista1366[chr1:42354251-42354647]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42354251 42354255 LFA1 TRANSFAC yes 118280525
chr1 42354272 42354277 ETS2 TRANSFAC yes 118280526
chr1 42354272 42354280 FEV JASPAR yes 118280527
chr1 42354273 42354287 JUN JASPAR yes 118280528
chr1 42354276 42354287 FOSL2 JASPAR yes 118280529
chr1 42354276 42354287 JUNB JASPAR yes 118280530
chr1 42354277 42354288 FOS JASPAR yes 118280531
chr1 42354279 42354290 BATF JASPAR yes 118280532
chr1 42354284 42354297 EOMES JASPAR yes 118280533
chr1 42354286 42354296 TBR1 JASPAR yes 118280534
chr1 42354286 42354297 TBX2 JASPAR yes 118280535
chr1 42354287 42354297 TBX21 JASPAR yes 118280536
chr1 42354288 42354296 MGA JASPAR yes 118280537
chr1 42354288 42354296 TBX15 JASPAR yes 118280538
chr1 42354288 42354296 TBX1 JASPAR yes 118280539
chr1 42354288 42354296 TBX4 JASPAR yes 118280540
chr1 42354288 42354296 TBX5 JASPAR yes 118280541
chr1 42354288 42354297 ZEB1 JASPAR yes 118280542
chr1 42354288 42354300 PKNOX1 JASPAR yes 118280543
chr1 42354288 42354300 PKNOX2 JASPAR yes 118280544
chr1 42354288 42354300 TGIF2 JASPAR yes 118280545
chr1 42354290 42354299 SNAI2 JASPAR yes 118280546
chr1 42354291 42354296 USF2 TRANSFAC yes 118280547
chr1 42354309 42354314 GATA2 JASPAR yes 118280548
chr1 42354336 42354346 TEAD1 JASPAR yes 118280549
chr1 42354350 42354360 ZNF740 JASPAR yes 118280550
chr1 42354351 42354371 RREB1 JASPAR yes 118280551
chr1 42354353 42354373 RREB1 JASPAR yes 118280552
chr1 42354372 42354386 PLAG1 JASPAR yes 118280553
chr1 42354374 42354385 TBX20 JASPAR yes 118280554
chr1 42354374 42354394 RREB1 JASPAR yes 118280555
chr1 42354376 42354384 MGA JASPAR yes 118280556
chr1 42354376 42354384 TBX15 JASPAR yes 118280557
chr1 42354376 42354384 TBX1 JASPAR yes 118280558
chr1 42354376 42354384 TBX4 JASPAR yes 118280559
chr1 42354376 42354384 TBX5 JASPAR yes 118280560
chr1 42354378 42354398 RREB1 JASPAR yes 118280561
chr1 42354379 42354389 ZNF740 JASPAR yes 118280562
chr1 42354379 42354393 GLIS2 JASPAR yes 118280563
chr1 42354379 42354393 GLIS3 JASPAR yes 118280564
chr1 42354380 42354400 RREB1 JASPAR yes 118280565
chr1 42354381 42354391 ZNF740 JASPAR yes 118280566
chr1 42354382 42354402 RREB1 JASPAR yes 118280567
chr1 42354385 42354405 RREB1 JASPAR yes 118280568
chr1 42354389 42354409 RREB1 JASPAR yes 118280569
chr1 42354390 42354400 TEAD1 JASPAR yes 118280570
chr1 42354390 42354400 TEAD4 JASPAR yes 118280571
chr1 42354392 42354407 RUNX2 JASPAR yes 118280572
chr1 42354410 42354430 RREB1 JASPAR yes 118280573
chr1 42354411 42354421 ZNF740 JASPAR yes 118280574
chr1 42354413 42354433 RREB1 JASPAR yes 118280575
chr1 42354416 42354431 RUNX2 JASPAR yes 118280576
chr1 42354421 42354431 TEAD1 JASPAR yes 118280577
chr1 42354431 42354442 NRF1 JASPAR yes 118280578
chr1 42354439 42354449 ZNF740 JASPAR yes 28433958
chr1 42354439 42354449 ZNF740 JASPAR yes 118280579
chr1 42354446 42354456 TEAD1 JASPAR yes 28433959
chr1 42354446 42354456 TEAD1 JASPAR yes 118280580
chr1 42354458 42354478 RREB1 JASPAR yes 28433960
chr1 42354458 42354478 RREB1 JASPAR yes 118280581
chr1 42354459 42354469 TEAD1 JASPAR yes 28433961
chr1 42354459 42354469 TEAD1 JASPAR yes 118280582
chr1 42354462 42354482 RREB1 JASPAR yes 28433962
chr1 42354462 42354482 RREB1 JASPAR yes 118280583
chr1 42354464 42354484 RREB1 JASPAR yes 28433963
chr1 42354464 42354484 RREB1 JASPAR yes 118280584
chr1 42354466 42354486 RREB1 JASPAR yes 28433964
chr1 42354466 42354486 RREB1 JASPAR yes 118280585
chr1 42354467 42354473 HiNF-A TRANSFAC yes 28433965
chr1 42354467 42354473 HiNF-A TRANSFAC yes 118280586
chr1 42354468 42354488 RREB1 JASPAR yes 28433966
chr1 42354468 42354488 RREB1 JASPAR yes 118280587
chr1 42354470 42354490 RREB1 JASPAR yes 28433967
chr1 42354470 42354490 RREB1 JASPAR yes 118280588
chr1 42354473 42354493 RREB1 JASPAR yes 28433968
chr1 42354473 42354493 RREB1 JASPAR yes 118280589
chr1 42354476 42354491 RUNX2 JASPAR yes 28433969
chr1 42354476 42354491 RUNX2 JASPAR yes 118280590
chr1 42354481 42354491 TEAD1 JASPAR yes 28433970
chr1 42354481 42354491 TEAD1 JASPAR yes 118280591
chr1 42354487 42354498 TBX20 JASPAR yes 28433971
chr1 42354487 42354498 TBX20 JASPAR yes 118280592
chr1 42354496 42354511 RUNX2 JASPAR yes 28433972
chr1 42354496 42354511 RUNX2 JASPAR yes 118280593
chr1 42354511 42354521 GCM2 JASPAR yes 28433973
chr1 42354511 42354521 GCM2 JASPAR yes 118280594
chr1 42354511 42354523 INSM1 JASPAR yes 28433974
chr1 42354511 42354523 INSM1 JASPAR yes 118280595
chr1 42354517 42354532 RUNX2 JASPAR yes 28433975
chr1 42354517 42354532 RUNX2 JASPAR yes 118280596
chr1 42354521 42354541 RREB1 JASPAR yes 28433976
chr1 42354521 42354541 RREB1 JASPAR yes 118280597
chr1 42354522 42354532 TEAD1 JASPAR yes 28433977
chr1 42354522 42354532 TEAD1 JASPAR yes 118280598
chr1 42354523 42354543 RREB1 JASPAR yes 28433978
chr1 42354523 42354543 RREB1 JASPAR yes 118280599
chr1 42354527 42354547 RREB1 JASPAR yes 28433979
chr1 42354527 42354547 RREB1 JASPAR yes 118280600
chr1 42354531 42354551 RREB1 JASPAR yes 28433980
chr1 42354531 42354551 RREB1 JASPAR yes 118280601
chr1 42354534 42354554 RREB1 JASPAR yes 28433981
chr1 42354534 42354554 RREB1 JASPAR yes 118280602
chr1 42354537 42354552 RUNX2 JASPAR yes 28433982
chr1 42354537 42354552 RUNX2 JASPAR yes 118280603
chr1 42354542 42354552 TEAD1 JASPAR yes 28433983
chr1 42354542 42354552 TEAD1 JASPAR yes 118280604
chr1 42354543 42354563 RREB1 JASPAR yes 28433984
chr1 42354543 42354563 RREB1 JASPAR yes 118280605
chr1 42354582 42354602 RREB1 JASPAR yes 28433985
chr1 42354582 42354602 RREB1 JASPAR yes 118280606
chr1 42354588 42354603 RUNX2 JASPAR yes 28433986
chr1 42354588 42354603 RUNX2 JASPAR yes 118280607
chr1 42354591 42354601 TFEB JASPAR yes 28433987
chr1 42354591 42354601 TFEB JASPAR yes 118280608
chr1 42354596 42354610 CREB3L1 JASPAR yes 28433988
chr1 42354596 42354610 CREB3L1 JASPAR yes 118280609
chr1 42354611 42354617 SOX10 JASPAR yes 28433989
chr1 42354611 42354617 SOX10 JASPAR yes 118280610
chr1 42354614 42354626 GLI2 JASPAR yes 28433990
chr1 42354614 42354626 GLI2 JASPAR yes 118280611
chr1 42354614 42354629 RUNX2 JASPAR yes 28433991
chr1 42354614 42354629 RUNX2 JASPAR yes 118280612
chr1 42354615 42354625 RUNX3 JASPAR yes 28433992
chr1 42354615 42354625 RUNX3 JASPAR yes 118280613
chr1 42354620 42354640 RREB1 JASPAR yes 28433993
chr1 42354620 42354640 RREB1 JASPAR yes 118280614
chr1 42354623 42354638 RUNX2 JASPAR yes 28433994
chr1 42354623 42354638 RUNX2 JASPAR yes 118280615
chr1 42354628 42354648 RREB1 JASPAR yes 28433995
chr1 42354628 42354648 RREB1 JASPAR yes 118280616
chr1 42354639 42354645 SOX10 JASPAR yes 28433996
chr1 42354639 42354645 SOX10 JASPAR yes 118280617
chr1 42354642 42354654 GLI2 JASPAR yes 28433997
chr1 42354642 42354654 GLI2 JASPAR yes 118280618
chr1 42354642 42354657 RUNX2 JASPAR yes 28433998
chr1 42354642 42354657 RUNX2 JASPAR yes 118280619
chr1 42354643 42354653 RUNX3 JASPAR yes 28433999
chr1 42354643 42354653 RUNX3 JASPAR yes 118280620
SNP sites on vista1366[chr1:42354251-42354647]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42354293 rs550742173 A G
EOMES MGA PKNOX1 PKNOX2 SNAI2 TBR1 TBX1 TBX15 TBX2 TBX21 TBX4 TBX5 TGIF2 USF2 ZEB1
265754
chr1 42354355 rs571789273 C T
RREB1 ZNF740
265755
chr1 42354439 rs534375286 C T
NRF1 ZNF740
265756
chr1 42354532 rs556137992 C A
RREB1 RUNX2 TEAD1
265757
chr1 42354628 rs543942580 CCACA C
RREB1 RUNX2
265758
Genes possibly regulated by vista1366[chr1:42354251-42354647]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1366[chr1:42354251-42354647]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results