EnhancerDB
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  3. rs556137992[chr1:42354532]
Enhancers that have rs556137992[chr1:42354532]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42354251 42354647 vista1366
VISTA
chr1 42354446 42370305 enh11796
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs556137992[chr1:42354532]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42354460 42354937 TCF7L2 GTRD no Colon (HCT116) 21325361
chr1 42354517 42354532 RUNX2 JASPAR yes 28433975
chr1 42354517 42354532 RUNX2 JASPAR yes 118280596
chr1 42354521 42354541 RREB1 JASPAR yes 28433976
chr1 42354521 42354541 RREB1 JASPAR yes 118280597
chr1 42354522 42354532 TEAD1 JASPAR yes 28433977
chr1 42354522 42354532 TEAD1 JASPAR yes 118280598
chr1 42354523 42354543 RREB1 JASPAR yes 28433978
chr1 42354523 42354543 RREB1 JASPAR yes 118280599
chr1 42354527 42354547 RREB1 JASPAR yes 28433979
chr1 42354527 42354547 RREB1 JASPAR yes 118280600
chr1 42354531 42354551 RREB1 JASPAR yes 28433980
chr1 42354531 42354551 RREB1 JASPAR yes 118280601
Genes associated with rs556137992[chr1:42354532], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More