EnhancerDB
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  3. vista1663[chr1:54953784-54954325]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1663[chr1:54953784-54954325]
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Tissue distribution of vista1663
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Transcription factor that possibly regulate vista1663[chr1:54953784-54954325]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 54953750 54954265 MAX UCSC Txn Factor no Conserved 107805125
chr1 54953758 54954442 E2F1 UCSC Txn Factor no Conserved 107805129
chr1 54953829 54954168 BHLHE40 UCSC Txn Factor no Conserved 107805144
chr1 54953830 54954294 MAZ UCSC Txn Factor no Conserved 107805145
chr1 54953846 54954253 CCNT2 UCSC Txn Factor no Conserved 107805151
chr1 54953870 54954374 TCF7L2 UCSC Txn Factor no Conserved 107805159
chr1 54953897 54954261 NFYB UCSC Txn Factor no Conserved 107805172
chr1 54953922 54954358 ELF1 UCSC Txn Factor no Conserved 107805193
chr1 54953947 54954212 HMGN3 UCSC Txn Factor no Conserved 107805208
chr1 54953784 54953802 SRF JASPAR yes 28989586
chr1 54953784 54953802 SRF JASPAR yes 118293099
chr1 54953794 54953804 NFATC3 JASPAR yes 28989587
chr1 54953794 54953804 NFATC3 JASPAR yes 118293100
chr1 54953796 54953803 NFATC2 JASPAR yes 28989588
chr1 54953796 54953803 NFATC2 JASPAR yes 118293101
chr1 54953797 54953805 FOXO3 JASPAR yes 28989589
chr1 54953797 54953805 FOXO3 JASPAR yes 118293102
chr1 54953800 54953820 TP63 JASPAR yes 28989590
chr1 54953800 54953820 TP63 JASPAR yes 118293103
chr1 54953817 54953829 FOXI1 JASPAR yes 28989591
chr1 54953817 54953829 FOXI1 JASPAR yes 118293104
chr1 54953821 54953827 HiNF-A TRANSFAC yes 28989592
chr1 54953821 54953827 HiNF-A TRANSFAC yes 118293105
chr1 54953829 54953849 RREB1 JASPAR yes 28989593
chr1 54953829 54953849 RREB1 JASPAR yes 118293106
chr1 54953848 54953859 NFKB1 JASPAR yes 28989594
chr1 54953848 54953859 NFKB1 JASPAR yes 118293107
chr1 54953851 54953872 ZNF263 JASPAR yes 28989595
chr1 54953851 54953872 ZNF263 JASPAR yes 118293108
chr1 54953853 54953867 E2F7 JASPAR yes 28989596
chr1 54953853 54953867 E2F7 JASPAR yes 118293109
chr1 54953855 54953865 ZNF740 JASPAR yes 28989597
chr1 54953855 54953865 ZNF740 JASPAR yes 118293110
chr1 54953859 54953869 SP1 JASPAR yes 28989598
chr1 54953859 54953869 SP1 JASPAR yes 118293111
chr1 54953862 54953876 GLIS3 JASPAR yes 28989599
chr1 54953862 54953876 GLIS3 JASPAR yes 118293112
chr1 54953927 54953942 TFAP2C JASPAR yes 28989600
chr1 54953927 54953942 TFAP2C JASPAR yes 118293113
chr1 54953928 54953939 TFAP2A JASPAR yes 28989601
chr1 54953928 54953939 TFAP2B JASPAR yes 28989602
chr1 54953928 54953939 TFAP2C JASPAR yes 28989603
chr1 54953928 54953939 TFAP2A JASPAR yes 118293114
chr1 54953928 54953939 TFAP2B JASPAR yes 118293115
chr1 54953928 54953939 TFAP2C JASPAR yes 118293116
chr1 54953929 54953938 TFAP2A JASPAR yes 28989604
chr1 54953929 54953938 TFAP2A JASPAR yes 118293117
chr1 54953933 54953942 SP1 TRANSFAC yes 28989605
chr1 54953933 54953942 SP1 TRANSFAC yes 118293118
chr1 54953934 54953939 SP1 TRANSFAC yes 28989606
chr1 54953934 54953939 SP1 TRANSFAC yes 118293119
chr1 54953936 54953950 PLAG1 JASPAR yes 28989607
chr1 54953936 54953950 PLAG1 JASPAR yes 118293120
chr1 54953942 54953952 ZNF740 JASPAR yes 28989608
chr1 54953942 54953952 ZNF740 JASPAR yes 118293121
chr1 54953946 54953953 SP1 TRANSFAC yes 28989609
chr1 54953946 54953953 SP1 TRANSFAC yes 118293122
chr1 54953947 54953957 SP1 JASPAR yes 28989610
chr1 54953947 54953957 SP1 JASPAR yes 118293123
chr1 54953948 54953953 SP1 TRANSFAC yes 28989611
chr1 54953948 54953953 SP1 TRANSFAC yes 118293124
chr1 54953963 54953967 LFA1 TRANSFAC yes 28989612
chr1 54953963 54953967 LFA1 TRANSFAC yes 118293125
chr1 54953969 54953981 HINFP JASPAR yes 28989613
chr1 54953969 54953981 HINFP JASPAR yes 118293126
chr1 54953990 54954000 HEY2 JASPAR yes 28989614
chr1 54953990 54954000 HEY2 JASPAR yes 118293127
chr1 54954004 54954022 MAFF JASPAR yes 28989615
chr1 54954004 54954022 MAFF JASPAR yes 118293128
chr1 54954005 54954020 MAFK JASPAR yes 28989616
chr1 54954005 54954020 MAFK JASPAR yes 118293129
chr1 54954009 54954020 NRL JASPAR yes 28989617
chr1 54954009 54954020 NRL JASPAR yes 118293130
chr1 54954011 54954027 SOX4 JASPAR yes 28989618
chr1 54954011 54954027 SOX4 JASPAR yes 118293131
chr1 54954037 54954052 ZIC3 JASPAR yes 28989619
chr1 54954037 54954052 ZIC3 JASPAR yes 118293132
chr1 54954039 54954059 RREB1 JASPAR yes 28989620
chr1 54954039 54954059 RREB1 JASPAR yes 118293133
chr1 54954041 54954046 SP1 TRANSFAC yes 28989621
chr1 54954041 54954046 SP1 TRANSFAC yes 118293134
chr1 54954042 54954052 ZNF740 JASPAR yes 28989622
chr1 54954042 54954052 ZNF740 JASPAR yes 118293135
chr1 54954044 54954054 SP1 JASPAR yes 28989623
chr1 54954044 54954054 SP1 JASPAR yes 118293136
chr1 54954047 54954052 SP1 TRANSFAC yes 28989624
chr1 54954047 54954052 SP1 TRANSFAC yes 118293137
chr1 54954060 54954080 ESR1 JASPAR yes 28989625
chr1 54954060 54954080 ESR1 JASPAR yes 118293138
chr1 54954066 54954070 LFA1 TRANSFAC yes 28989626
chr1 54954066 54954070 LFA1 TRANSFAC yes 118293139
chr1 54954085 54954096 NRF1 JASPAR yes 28989627
chr1 54954085 54954096 NRF1 JASPAR yes 118293140
chr1 54954090 54954108 NFYA JASPAR yes 28989628
chr1 54954090 54954108 NFYA JASPAR yes 118293141
chr1 54954093 54954109 NFYA JASPAR yes 28989629
chr1 54954093 54954109 NFYA JASPAR yes 118293142
chr1 54954095 54954105 EN2 JASPAR yes 28989630
chr1 54954095 54954105 EN2 JASPAR yes 118293143
chr1 54954096 54954111 NFYB JASPAR yes 28989631
chr1 54954096 54954111 NFYB JASPAR yes 118293144
chr1 54954098 54954103 NFY TRANSFAC yes 28989632
chr1 54954098 54954103 NFY TRANSFAC yes 118293145
chr1 54954136 54954142 SP1 TRANSFAC yes 28989633
chr1 54954136 54954142 SP1 TRANSFAC yes 118293146
chr1 54954136 54954146 SP1 JASPAR yes 28989634
chr1 54954136 54954146 SP1 JASPAR yes 118293147
chr1 54954136 54954151 ZIC3 JASPAR yes 28989635
chr1 54954136 54954151 ZIC3 JASPAR yes 118293148
chr1 54954137 54954147 SP1 JASPAR yes 28989636
chr1 54954137 54954147 SP1 JASPAR yes 118293149
chr1 54954138 54954154 GLIS1 JASPAR yes 28989637
chr1 54954138 54954154 GLIS1 JASPAR yes 118293150
chr1 54954138 54954159 ZNF263 JASPAR yes 28989638
chr1 54954138 54954159 ZNF263 JASPAR yes 118293151
chr1 54954156 54954168 EHF JASPAR yes 28989639
chr1 54954156 54954168 ELF4 JASPAR yes 28989640
chr1 54954156 54954168 EHF JASPAR yes 118293152
chr1 54954156 54954168 ELF4 JASPAR yes 118293153
chr1 54954156 54954169 ELF3 JASPAR yes 28989641
chr1 54954156 54954169 ELF3 JASPAR yes 118293154
chr1 54954160 54954166 ETS1 JASPAR yes 28989642
chr1 54954160 54954166 SPI1 JASPAR yes 28989643
chr1 54954160 54954166 ETS1 JASPAR yes 118293155
chr1 54954160 54954166 SPI1 JASPAR yes 118293156
chr1 54954163 54954168 ETS2 TRANSFAC yes 28989644
chr1 54954163 54954168 ETS2 TRANSFAC yes 118293157
chr1 54954163 54954173 TEAD4 JASPAR yes 28989645
chr1 54954163 54954173 TEAD4 JASPAR yes 118293158
chr1 54954164 54954175 NFKB1 JASPAR yes 28989646
chr1 54954164 54954175 NFKB1 JASPAR yes 118293159
chr1 54954165 54954174 NF-kappaB TRANSFAC yes 28989647
chr1 54954165 54954174 NF-kappaB TRANSFAC yes 118293160
chr1 54954168 54954176 FEV JASPAR yes 28989648
chr1 54954168 54954176 FEV JASPAR yes 118293161
chr1 54954188 54954197 SOX9 JASPAR yes 28989649
chr1 54954188 54954197 SOX9 JASPAR yes 118293162
chr1 54954219 54954231 HLF JASPAR yes 28989650
chr1 54954219 54954231 HLF JASPAR yes 118293163
chr1 54954224 54954240 RFX2 JASPAR yes 28989651
chr1 54954224 54954240 RFX3 JASPAR yes 28989652
chr1 54954224 54954240 RFX4 JASPAR yes 28989653
chr1 54954224 54954240 RFX5 JASPAR yes 28989654
chr1 54954224 54954240 RFX2 JASPAR yes 118293164
chr1 54954224 54954240 RFX3 JASPAR yes 118293165
chr1 54954224 54954240 RFX4 JASPAR yes 118293166
chr1 54954224 54954240 RFX5 JASPAR yes 118293167
chr1 54954226 54954229 MYB TRANSFAC yes 28989655
chr1 54954226 54954229 MYB TRANSFAC yes 118293168
chr1 54954226 54954237 RUNX1 JASPAR yes 28989656
chr1 54954226 54954237 RUNX1 JASPAR yes 118293169
chr1 54954235 54954240 GATA2 JASPAR yes 28989657
chr1 54954235 54954240 GATA2 JASPAR yes 118293170
chr1 54954255 54954260 SP1 TRANSFAC yes 28989658
chr1 54954255 54954260 SP1 TRANSFAC yes 118293171
chr1 54954278 54954293 NR2C2 JASPAR yes 28989659
chr1 54954278 54954293 NR2C2 JASPAR yes 118293172
chr1 54954283 54954304 ZNF263 JASPAR yes 28989660
chr1 54954283 54954304 ZNF263 JASPAR yes 118293173
chr1 54954285 54954295 ZNF740 JASPAR yes 28989661
chr1 54954285 54954295 ZNF740 JASPAR yes 118293174
chr1 54954288 54954308 RREB1 JASPAR yes 28989662
chr1 54954288 54954308 RREB1 JASPAR yes 118293175
chr1 54954296 54954312 GLIS1 JASPAR yes 28989663
chr1 54954296 54954312 GLIS1 JASPAR yes 118293176
chr1 54954297 54954307 ZNF740 JASPAR yes 28989664
chr1 54954297 54954307 ZNF740 JASPAR yes 118293177
chr1 54954297 54954311 GLIS2 JASPAR yes 28989665
chr1 54954297 54954311 GLIS3 JASPAR yes 28989666
chr1 54954297 54954311 GLIS2 JASPAR yes 118293178
chr1 54954297 54954311 GLIS3 JASPAR yes 118293179
chr1 54954297 54954312 ZIC3 JASPAR yes 28989667
chr1 54954297 54954312 ZIC3 JASPAR yes 118293180
chr1 54954301 54954322 IRF1 JASPAR yes 28989668
chr1 54954301 54954322 IRF1 JASPAR yes 118293181
chr1 54954302 54954323 IRF1 JASPAR yes 28989669
chr1 54954302 54954323 IRF1 JASPAR yes 118293182
chr1 54954303 54954318 PRDM1 JASPAR yes 28989670
chr1 54954303 54954318 STAT2 JASPAR yes 28989671
chr1 54954303 54954318 PRDM1 JASPAR yes 118293183
chr1 54954303 54954318 STAT2 JASPAR yes 118293184
chr1 54954306 54954321 FOXP1 JASPAR yes 28989672
chr1 54954306 54954321 FOXP1 JASPAR yes 118293185
chr1 54954307 54954322 FOXP1 JASPAR yes 28989673
chr1 54954307 54954322 FOXP1 JASPAR yes 118293186
chr1 54954308 54954323 FOXP1 JASPAR yes 28989674
chr1 54954308 54954323 FOXP1 JASPAR yes 118293187
SNP sites on vista1663[chr1:54953784-54954325]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 54953833 rs554946262 CAG C
BHLHE40 E2F1 MAX MAZ RREB1
321154
chr1 54953836 rs368409730 G A,T
BHLHE40 E2F1 MAX MAZ RREB1
321155
chr1 54953851 rs566328887 G T
BHLHE40 CCNT2 E2F1 MAX MAZ NFKB1 ZNF263
321156
chr1 54953895 rs573360515 GC G
BHLHE40 CCNT2 E2F1 MAX MAZ TCF7L2
321157
chr1 54953944 rs538045334 T G
BHLHE40 CCNT2 E2F1 ELF1 MAX MAZ NFYB PLAG1 TCF7L2 ZNF740
321158
chr1 54953945 rs557866377 G A,T
BHLHE40 CCNT2 E2F1 ELF1 MAX MAZ NFYB PLAG1 TCF7L2 ZNF740
321159
chr1 54953946 rs375011844 G C,T
BHLHE40 CCNT2 E2F1 ELF1 MAX MAZ NFYB PLAG1 SP1 TCF7L2 ZNF740
321160
chr1 54953947 rs299853 G C,T
BHLHE40 CCNT2 E2F1 ELF1 HMGN3 MAX MAZ NFYB PLAG1 SP1 TCF7L2 ZNF740
321161
chr1 54953955 rs177264 T C
BHLHE40 CCNT2 E2F1 ELF1 HMGN3 MAX MAZ NFYB SP1 TCF7L2
321162
chr1 54954044 rs190962 T A,C,G
BHLHE40 CCNT2 E2F1 ELF1 HMGN3 MAX MAZ NFYB RREB1 SP1 TCF7L2 ZIC3 ZNF740
321163
chr1 54954245 rs6691924 C T
CCNT2 E2F1 ELF1 MAX MAZ NFYB TCF7L2
321164
chr1 54954271 rs12129580 G A
E2F1 ELF1 MAZ TCF7L2
321165
chr1 54954307 rs9662526 C G
E2F1 ELF1 FOXP1 GLIS1 GLIS2 GLIS3 IRF1 PRDM1 RREB1 STAT2 TCF7L2 ZIC3 ZNF740
321166
Genes possibly regulated by vista1663[chr1:54953784-54954325]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 54691105 54879152 - SSBP3 ENSG00000157216.11 54879152 0.79 1.0 730 25368
chr1 55007930 55104865 + ACOT11 ENSG00000162390.13 55007930 0.84 1.0 732 46395
Expression level of Genes
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miRNAs possibly regulated by vista1663[chr1:54953784-54954325]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results