EnhancerDB
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  3. rs190962[chr1:54954044]
Enhancers that have rs190962[chr1:54954044]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54937905 54958655 enh11871
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Muscle (A673) Placenta Pancreas (Panc1) Uterus Thymus
chr1 54953784 54954325 vista1663
VISTA
Transcript factors that have rs190962[chr1:54954044]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54953606 54954182 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805114
chr1 54953627 54954157 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805115
chr1 54953683 54954199 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805116
chr1 54953688 54954048 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805117
chr1 54953695 54954215 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805118
chr1 54953707 54954147 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805119
chr1 54953712 54954156 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107805120
chr1 54953713 54954149 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805121
chr1 54953740 54954144 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805123
chr1 54953750 54954186 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805124
chr1 54953750 54954265 MAX UCSC Txn Factor no Conserved 107805125
chr1 54953751 54954155 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805126
chr1 54953754 54954370 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805127
chr1 54953758 54954047 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107805128
chr1 54953758 54954442 E2F1 UCSC Txn Factor no Conserved 107805129
chr1 54953763 54954093 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805130
chr1 54953765 54954145 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805131
chr1 54953773 54954189 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805133
chr1 54953783 54954139 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805134
chr1 54953786 54954442 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107805135
chr1 54953788 54954265 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805136
chr1 54953790 54954226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805137
chr1 54953792 54954188 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805138
chr1 54953794 54954404 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805139
chr1 54953797 54954133 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805140
chr1 54953803 54954173 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805142
chr1 54953829 54954159 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805143
chr1 54953829 54954168 BHLHE40 UCSC Txn Factor no Conserved 107805144
chr1 54953830 54954294 MAZ UCSC Txn Factor no Conserved 107805145
chr1 54953830 54954294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805146
chr1 54953831 54954169 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805147
chr1 54953832 54954411 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805148
chr1 54953838 54954274 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805149
chr1 54953839 54954219 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805150
chr1 54953846 54954253 CCNT2 UCSC Txn Factor no Conserved 107805151
chr1 54953846 54954253 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805152
chr1 54953849 54954213 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805153
chr1 54953851 54954111 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805154
chr1 54953862 54954222 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805156
chr1 54953867 54954187 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805157
chr1 54953868 54954172 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805158
chr1 54953870 54954374 TCF7L2 UCSC Txn Factor no Conserved 107805159
chr1 54953870 54954374 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805160
chr1 54953871 54954181 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107805161
chr1 54953871 54954181 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805162
chr1 54953873 54954130 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805163
chr1 54953874 54954210 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805164
chr1 54953880 54954252 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805165
chr1 54953883 54954163 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107805166
chr1 54953883 54954267 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805167
chr1 54953885 54954245 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805168
chr1 54953885 54954285 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805169
chr1 54953886 54954182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805170
chr1 54953897 54954167 ZNF274 GTRD no Liver (HepG2) 107805171
chr1 54953897 54954261 NFYB UCSC Txn Factor no Conserved 107805172
chr1 54953897 54954261 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805173
chr1 54953897 54954287 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805174
chr1 54953899 54954143 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805175
chr1 54953902 54954278 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805176
chr1 54953903 54954223 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805177
chr1 54953903 54954379 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805178
chr1 54953905 54954145 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805179
chr1 54953907 54954483 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805180
chr1 54953907 54954483 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805181
chr1 54953908 54954098 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805182
chr1 54953908 54954278 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805183
chr1 54953910 54954160 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805184
chr1 54953913 54954283 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805186
chr1 54953915 54954139 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805187
chr1 54953917 54954257 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805188
chr1 54953917 54954273 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805189
chr1 54953919 54954195 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805190
chr1 54953919 54954299 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805191
chr1 54953921 54954361 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107805192
chr1 54953922 54954358 ELF1 UCSC Txn Factor no Conserved 107805193
chr1 54953922 54954358 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107805194
chr1 54953924 54954260 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805195
chr1 54953927 54954251 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805196
chr1 54953931 54954271 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805197
chr1 54953931 54954451 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805198
chr1 54953938 54954278 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805200
chr1 54953940 54954396 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805201
chr1 54953941 54954237 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107805202
chr1 54953941 54954257 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805203
chr1 54953943 54954333 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805204
chr1 54953944 54954194 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805205
chr1 54953946 54954282 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805206
chr1 54953946 54954330 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805207
chr1 54953947 54954212 HMGN3 UCSC Txn Factor no Conserved 107805208
chr1 54953947 54954212 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805209
chr1 54953947 54954223 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805210
chr1 54953952 54954232 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107805211
chr1 54953953 54954243 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805212
chr1 54953958 54954334 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805213
chr1 54953964 54954324 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805214
chr1 54953965 54954195 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805215
chr1 54953965 54954205 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805216
chr1 54953966 54954222 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805217
chr1 54953969 54954309 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805218
chr1 54953974 54954324 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805219
chr1 54953975 54954318 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805220
chr1 54953976 54954256 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805221
chr1 54953977 54954293 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805222
chr1 54953978 54954208 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805223
chr1 54953978 54954334 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107805224
chr1 54953980 54954324 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805225
chr1 54953981 54954311 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805226
chr1 54953982 54954246 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805227
chr1 54953983 54954283 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805228
chr1 54953984 54954135 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805229
chr1 54953984 54954254 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805230
chr1 54953985 54954255 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805231
chr1 54953987 54954443 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805232
chr1 54953992 54954174 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805233
chr1 54953992 54954316 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805234
chr1 54953993 54954156 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805235
chr1 54953995 54954151 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805236
chr1 54954000 54954384 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107805237
chr1 54954001 54954377 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805238
chr1 54954002 54954183 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805239
chr1 54954003 54954359 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805240
chr1 54954005 54954265 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805241
chr1 54954005 54954269 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107805242
chr1 54954007 54954347 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805243
chr1 54954013 54954269 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805244
chr1 54954016 54954123 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805245
chr1 54954016 54954286 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107805246
chr1 54954020 54954303 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107805247
chr1 54954020 54954330 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107805248
chr1 54954023 54954317 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805249
chr1 54954027 54954337 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107805250
chr1 54954035 54954264 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107805251
chr1 54954037 54954052 ZIC3 JASPAR yes 28989619
chr1 54954037 54954052 ZIC3 JASPAR yes 118293132
chr1 54954038 54954238 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805252
chr1 54954039 54954059 RREB1 JASPAR yes 28989620
chr1 54954039 54954059 RREB1 JASPAR yes 118293133
chr1 54954040 54954304 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107805253
chr1 54954041 54954046 SP1 TRANSFAC yes 28989621
chr1 54954041 54954046 SP1 TRANSFAC yes 118293134
chr1 54954042 54954052 ZNF740 JASPAR yes 28989622
chr1 54954042 54954052 ZNF740 JASPAR yes 118293135
chr1 54954042 54954164 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805254
chr1 54954043 54954238 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107805255
chr1 54954044 54954054 SP1 JASPAR yes 28989623
chr1 54954044 54954054 SP1 JASPAR yes 118293136
Genes associated with rs190962[chr1:54954044], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More