EnhancerDB
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  3. vista17041[chr13:110991031-110991380]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista17041[chr13:110991031-110991380]
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Tissue distribution of vista17041
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Transcription factor that possibly regulate vista17041[chr13:110991031-110991380]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr13 110991032 110991047 FOXP1 JASPAR yes 19342561
chr13 110991032 110991047 FOXP1 JASPAR yes 60339183
chr13 110991033 110991042 SRY JASPAR yes 19342562
chr13 110991033 110991042 SRY JASPAR yes 60339184
chr13 110991033 110991044 FOXP2 JASPAR yes 19342563
chr13 110991033 110991044 FOXP2 JASPAR yes 60339185
chr13 110991035 110991043 FOXO3 JASPAR yes 19342564
chr13 110991035 110991043 FOXO3 JASPAR yes 60339186
chr13 110991045 110991058 SMAD2 JASPAR yes 19342565
chr13 110991045 110991058 SMAD2 JASPAR yes 60339187
chr13 110991067 110991072 ETS2 TRANSFAC yes 19342566
chr13 110991067 110991072 ETS2 TRANSFAC yes 60339188
chr13 110991087 110991091 NFE TRANSFAC yes 19342567
chr13 110991087 110991091 NFE TRANSFAC yes 60339189
chr13 110991113 110991131 ESR2 JASPAR yes 19342568
chr13 110991113 110991131 ESR2 JASPAR yes 60339190
chr13 110991115 110991128 SMAD2 JASPAR yes 19342569
chr13 110991115 110991128 SMAD2 JASPAR yes 60339191
chr13 110991115 110991135 ESR1 JASPAR yes 19342570
chr13 110991115 110991135 ESR1 JASPAR yes 60339192
chr13 110991133 110991138 SP1 TRANSFAC yes 19342571
chr13 110991133 110991138 SP1 TRANSFAC yes 60339193
chr13 110991133 110991152 REST JASPAR yes 19342572
chr13 110991133 110991152 REST JASPAR yes 60339194
chr13 110991176 110991185 THAP1 JASPAR yes 19342573
chr13 110991176 110991185 THAP1 JASPAR yes 60339195
chr13 110991177 110991189 TFAP2A JASPAR yes 19342574
chr13 110991177 110991189 TFAP2B JASPAR yes 19342575
chr13 110991177 110991189 TFAP2C JASPAR yes 19342576
chr13 110991177 110991189 TFAP2A JASPAR yes 60339196
chr13 110991177 110991189 TFAP2B JASPAR yes 60339197
chr13 110991177 110991189 TFAP2C JASPAR yes 60339198
chr13 110991190 110991198 NR4A2 JASPAR yes 19342577
chr13 110991190 110991198 NR4A2 JASPAR yes 60339199
chr13 110991192 110991196 ESR1 TRANSFAC yes 19342578
chr13 110991192 110991196 ESR1 TRANSFAC yes 60339200
chr13 110991217 110991237 RREB1 JASPAR yes 19342579
chr13 110991217 110991237 RREB1 JASPAR yes 60339201
chr13 110991225 110991231 TCF4 TRANSFAC yes 19342580
chr13 110991225 110991231 TCF4 TRANSFAC yes 60339202
chr13 110991230 110991250 RREB1 JASPAR yes 19342581
chr13 110991230 110991250 RREB1 JASPAR yes 60339203
chr13 110991236 110991257 IRF1 JASPAR yes 19342582
chr13 110991236 110991257 IRF1 JASPAR yes 60339204
chr13 110991237 110991243 LEF1 TRANSFAC yes 19342583
chr13 110991237 110991243 SOX10 JASPAR yes 19342584
chr13 110991237 110991243 LEF1 TRANSFAC yes 60339205
chr13 110991237 110991243 SOX10 JASPAR yes 60339206
chr13 110991237 110991252 FOXP1 JASPAR yes 19342585
chr13 110991237 110991252 FOXP1 JASPAR yes 60339207
chr13 110991238 110991253 STAT2 JASPAR yes 19342586
chr13 110991238 110991253 STAT2 JASPAR yes 60339208
chr13 110991239 110991253 STAT1 JASPAR yes 19342587
chr13 110991239 110991253 STAT1 JASPAR yes 60339209
chr13 110991240 110991252 IRF1 JASPAR yes 19342588
chr13 110991240 110991252 IRF1 JASPAR yes 60339210
chr13 110991240 110991254 IRF7 JASPAR yes 19342589
chr13 110991240 110991254 IRF7 JASPAR yes 60339211
chr13 110991240 110991255 IRF9 JASPAR yes 19342590
chr13 110991240 110991255 IRF9 JASPAR yes 60339212
chr13 110991242 110991248 TCF4 TRANSFAC yes 19342591
chr13 110991242 110991248 TCF4 TRANSFAC yes 60339213
chr13 110991242 110991257 FOXP1 JASPAR yes 19342592
chr13 110991242 110991257 FOXP1 JASPAR yes 60339214
chr13 110991243 110991252 SRY JASPAR yes 19342593
chr13 110991243 110991252 SRY JASPAR yes 60339215
chr13 110991243 110991254 FOXP2 JASPAR yes 19342594
chr13 110991243 110991254 FOXP2 JASPAR yes 60339216
chr13 110991243 110991255 FOXC2 JASPAR yes 19342595
chr13 110991243 110991255 FOXC2 JASPAR yes 60339217
chr13 110991244 110991255 FOXC1 JASPAR yes 19342596
chr13 110991244 110991255 FOXC1 JASPAR yes 60339218
chr13 110991245 110991256 FOXA1 JASPAR yes 19342597
chr13 110991245 110991256 FOXA1 JASPAR yes 60339219
chr13 110991253 110991260 NKX3-1 JASPAR yes 19342598
chr13 110991253 110991260 NKX3-1 JASPAR yes 60339220
chr13 110991256 110991261 GATA1 TRANSFAC yes 19342599
chr13 110991256 110991261 GATA1 TRANSFAC yes 60339221
chr13 110991287 110991305 SRF JASPAR yes 19342600
chr13 110991287 110991305 SRF JASPAR yes 60339222
chr13 110991290 110991302 SRF JASPAR yes 19342601
chr13 110991290 110991302 SRF JASPAR yes 60339223
chr13 110991291 110991300 CDX1 JASPAR yes 19342602
chr13 110991291 110991300 CDX1 JASPAR yes 60339224
chr13 110991291 110991301 HOXA13 JASPAR yes 19342603
chr13 110991291 110991301 HOXB13 JASPAR yes 19342604
chr13 110991291 110991301 HOXD13 JASPAR yes 19342605
chr13 110991291 110991301 HOXA13 JASPAR yes 60339225
chr13 110991291 110991301 HOXB13 JASPAR yes 60339226
chr13 110991291 110991301 HOXD13 JASPAR yes 60339227
chr13 110991293 110991307 SPIC JASPAR yes 19342606
chr13 110991293 110991307 SPIC JASPAR yes 60339228
chr13 110991298 110991303 ETS2 TRANSFAC yes 19342607
chr13 110991298 110991303 ETS2 TRANSFAC yes 60339229
chr13 110991329 110991345 ZNF143 JASPAR yes 19342608
chr13 110991329 110991345 ZNF143 JASPAR yes 60339230
chr13 110991331 110991346 RUNX2 JASPAR yes 19342609
chr13 110991331 110991346 RUNX2 JASPAR yes 60339231
chr13 110991334 110991345 RUNX1 JASPAR yes 19342610
chr13 110991334 110991345 RUNX1 JASPAR yes 60339232
chr13 110991335 110991345 RUNX3 JASPAR yes 19342611
chr13 110991335 110991345 RUNX3 JASPAR yes 60339233
chr13 110991336 110991345 RUNX2 JASPAR yes 19342612
chr13 110991336 110991345 RUNX2 JASPAR yes 60339234
chr13 110991342 110991348 NFIC JASPAR yes 19342613
chr13 110991342 110991348 NFIC JASPAR yes 60339235
chr13 110991353 110991374 REST JASPAR yes 19342614
chr13 110991353 110991374 REST JASPAR yes 60339236
SNP sites on vista17041[chr13:110991031-110991380]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr13 110991048 rs11619583 C T
SMAD2
3393292
chr13 110991133 rs79907368 G A,T
ESR1 REST SP1
3393293
chr13 110991189 rs1556124 G A,T
TFAP2A TFAP2B TFAP2C
3393294
chr13 110991201 rs537114959 C A,T no 3393295
chr13 110991285 rs7322495 C T no 3393296
chr13 110991344 rs555259405 TG T
NFIC RUNX1 RUNX2 RUNX3 ZNF143
3393297
Genes possibly regulated by vista17041[chr13:110991031-110991380]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr13 110801318 110959496 - COL4A1 ENSG00000187498.10 110959496 0.85 0.93 13019 68465
chr13 110958159 111165374 + COL4A2 ENSG00000134871.13 110958159 0.78 0.91 13020 67128
Expression level of Genes
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miRNAs possibly regulated by vista17041[chr13:110991031-110991380]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results