EnhancerDB
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  3. rs1556124[chr13:110991189]
Enhancers that have rs1556124[chr13:110991189]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 110979129 111037007 enh15497
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr13 110991031 110991380 vista17041
VISTA
Transcript factors that have rs1556124[chr13:110991189]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 110991177 110991189 TFAP2A JASPAR yes 19342574
chr13 110991177 110991189 TFAP2B JASPAR yes 19342575
chr13 110991177 110991189 TFAP2C JASPAR yes 19342576
chr13 110991177 110991189 TFAP2A JASPAR yes 60339196
chr13 110991177 110991189 TFAP2B JASPAR yes 60339197
chr13 110991177 110991189 TFAP2C JASPAR yes 60339198
Genes associated with rs1556124[chr13:110991189], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More