EnhancerDB
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  3. rs555259405[chr13:110991344]
Enhancers that have rs555259405[chr13:110991344]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 110979129 111037007 enh15497
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr13 110991031 110991380 vista17041
VISTA
Transcript factors that have rs555259405[chr13:110991344]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 110991329 110991345 ZNF143 JASPAR yes 19342608
chr13 110991329 110991345 ZNF143 JASPAR yes 60339230
chr13 110991331 110991346 RUNX2 JASPAR yes 19342609
chr13 110991331 110991346 RUNX2 JASPAR yes 60339231
chr13 110991334 110991345 RUNX1 JASPAR yes 19342610
chr13 110991334 110991345 RUNX1 JASPAR yes 60339232
chr13 110991335 110991345 RUNX3 JASPAR yes 19342611
chr13 110991335 110991345 RUNX3 JASPAR yes 60339233
chr13 110991336 110991345 RUNX2 JASPAR yes 19342612
chr13 110991336 110991345 RUNX2 JASPAR yes 60339234
chr13 110991342 110991348 NFIC JASPAR yes 19342613
chr13 110991342 110991348 NFIC JASPAR yes 60339235
Genes associated with rs555259405[chr13:110991344], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More