EnhancerDB
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  3. vista22058[chr16:17543225-17543492]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista22058[chr16:17543225-17543492]
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Tissue distribution of vista22058
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Transcription factor that possibly regulate vista22058[chr16:17543225-17543492]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 17543222 17543227 NFY TRANSFAC yes 9810591
chr16 17543222 17543227 NFY TRANSFAC yes 49351065
chr16 17543224 17543238 TLX1 JASPAR yes 9810592
chr16 17543224 17543238 TLX1 JASPAR yes 49351066
chr16 17543237 17543252 TFAP2C JASPAR yes 9810593
chr16 17543237 17543252 TFAP2C JASPAR yes 49351067
chr16 17543240 17543253 ZBTB18 JASPAR yes 9810594
chr16 17543240 17543253 ZBTB18 JASPAR yes 49351068
chr16 17543242 17543252 NHLH1 JASPAR yes 9810595
chr16 17543242 17543252 NHLH1 JASPAR yes 49351069
chr16 17543254 17543264 ETV6 JASPAR yes 9810596
chr16 17543254 17543264 ETV6 JASPAR yes 49351070
chr16 17543254 17543268 SPI1 JASPAR yes 9810597
chr16 17543254 17543268 SPI1 JASPAR yes 49351071
chr16 17543258 17543271 TFAP2A JASPAR yes 9810598
chr16 17543258 17543271 TFAP2B JASPAR yes 9810599
chr16 17543258 17543271 TFAP2C JASPAR yes 9810600
chr16 17543258 17543271 TFAP2A JASPAR yes 49351072
chr16 17543258 17543271 TFAP2B JASPAR yes 49351073
chr16 17543258 17543271 TFAP2C JASPAR yes 49351074
chr16 17543273 17543283 SP1 JASPAR yes 9810601
chr16 17543273 17543283 SP1 JASPAR yes 49351075
chr16 17543280 17543284 LFA1 TRANSFAC yes 9810602
chr16 17543280 17543284 LFA1 TRANSFAC yes 49351076
chr16 17543287 17543308 REST JASPAR yes 9810603
chr16 17543287 17543308 REST JASPAR yes 49351077
chr16 17543288 17543307 REST JASPAR yes 9810604
chr16 17543288 17543307 REST JASPAR yes 49351078
chr16 17543290 17543300 FIGLA JASPAR yes 9810605
chr16 17543290 17543300 ID4 JASPAR yes 9810606
chr16 17543290 17543300 TCF3 JASPAR yes 9810607
chr16 17543290 17543300 TCF4 JASPAR yes 9810608
chr16 17543290 17543300 FIGLA JASPAR yes 49351079
chr16 17543290 17543300 ID4 JASPAR yes 49351080
chr16 17543290 17543300 TCF3 JASPAR yes 49351081
chr16 17543290 17543300 TCF4 JASPAR yes 49351082
chr16 17543292 17543297 USF2 TRANSFAC yes 9810609
chr16 17543292 17543297 USF2 TRANSFAC yes 49351083
chr16 17543314 17543318 NFE TRANSFAC yes 9810610
chr16 17543314 17543318 NFE TRANSFAC yes 49351084
chr16 17543314 17543327 SMAD2 JASPAR yes 9810611
chr16 17543314 17543327 SMAD2 JASPAR yes 49351085
chr16 17543356 17543370 CREB3 JASPAR yes 9810612
chr16 17543356 17543370 CREB3L1 JASPAR yes 9810613
chr16 17543356 17543370 CREB3 JASPAR yes 49351086
chr16 17543356 17543370 CREB3L1 JASPAR yes 49351087
chr16 17543357 17543371 XBP1 JASPAR yes 9810614
chr16 17543357 17543371 XBP1 JASPAR yes 49351088
chr16 17543359 17543364 ATF1 TRANSFAC yes 9810615
chr16 17543359 17543364 ATF1 TRANSFAC yes 49351089
chr16 17543387 17543392 TFAP2A TRANSFAC yes 9810616
chr16 17543387 17543392 TFAP2A TRANSFAC yes 49351090
chr16 17543387 17543393 MZF1 JASPAR yes 9810617
chr16 17543387 17543393 MZF1 JASPAR yes 49351091
chr16 17543414 17543424 ETV6 JASPAR yes 9810618
chr16 17543414 17543424 ETV6 JASPAR yes 49351092
chr16 17543433 17543444 ELK4 JASPAR yes 9810619
chr16 17543433 17543444 FLI1 JASPAR yes 9810620
chr16 17543433 17543444 ELK4 JASPAR yes 49351093
chr16 17543433 17543444 FLI1 JASPAR yes 49351094
chr16 17543434 17543444 ETV6 JASPAR yes 9810621
chr16 17543434 17543444 GABPA JASPAR yes 9810622
chr16 17543434 17543444 ETV6 JASPAR yes 49351095
chr16 17543434 17543444 GABPA JASPAR yes 49351096
chr16 17543434 17543447 ELF1 JASPAR yes 9810623
chr16 17543434 17543447 ELF1 JASPAR yes 49351097
chr16 17543434 17543448 SPIC JASPAR yes 9810624
chr16 17543434 17543448 SPIC JASPAR yes 49351098
chr16 17543435 17543442 SPI1 JASPAR yes 9810625
chr16 17543435 17543442 SPI1 JASPAR yes 49351099
chr16 17543435 17543443 EHF JASPAR yes 9810626
chr16 17543435 17543443 EHF JASPAR yes 49351100
chr16 17543437 17543444 SPIB JASPAR yes 9810627
chr16 17543437 17543444 SPIB JASPAR yes 49351101
chr16 17543442 17543446 NFE TRANSFAC yes 9810628
chr16 17543442 17543446 NFE TRANSFAC yes 49351102
chr16 17543445 17543455 HOXB13 JASPAR yes 9810629
chr16 17543445 17543455 HOXB13 JASPAR yes 49351103
chr16 17543465 17543476 NRL JASPAR yes 9810630
chr16 17543465 17543476 NRL JASPAR yes 49351104
chr16 17543492 17543508 POU4F3 JASPAR yes 9810631
chr16 17543492 17543508 POU4F3 JASPAR yes 49351105
SNP sites on vista22058[chr16:17543225-17543492]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 17543252 rs9938199 G C
NHLH1 TFAP2C ZBTB18
4356052
chr16 17543258 rs143886477 T A
ETV6 SPI1 TFAP2A TFAP2B TFAP2C
4356053
chr16 17543274 rs146891017 G A
SP1
4356054
chr16 17543335 rs558975338 C T no 4356055
chr16 17543383 rs116221348 G C no 4356056
Genes possibly regulated by vista22058[chr16:17543225-17543492]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 17195626 17564738 - XYLT1 ENSG00000103489.7 17564738 0.8 0.99 14586 78754
Expression level of Genes
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miRNAs possibly regulated by vista22058[chr16:17543225-17543492]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results