EnhancerDB
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  3. rs9938199[chr16:17543252]
Enhancers that have rs9938199[chr16:17543252]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 17540471 17563535 enh3927
Ovary Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell) Stomach
chr16 17543225 17543492 vista22058
VISTA
Transcript factors that have rs9938199[chr16:17543252]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 17543224 17543594 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21694891
chr16 17543224 17543594 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108186258
chr16 17543237 17543252 TFAP2C JASPAR yes 9810593
chr16 17543237 17543252 TFAP2C JASPAR yes 49351067
chr16 17543240 17543253 ZBTB18 JASPAR yes 9810594
chr16 17543240 17543253 ZBTB18 JASPAR yes 49351068
chr16 17543242 17543252 NHLH1 JASPAR yes 9810595
chr16 17543242 17543252 NHLH1 JASPAR yes 49351069
Genes associated with rs9938199[chr16:17543252], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More