EnhancerDB
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  3. rs143886477[chr16:17543258]
Enhancers that have rs143886477[chr16:17543258]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 17540471 17563535 enh3927
Ovary Astrocyte Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell) Stomach
chr16 17543225 17543492 vista22058
VISTA
Transcript factors that have rs143886477[chr16:17543258]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 17543224 17543594 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21694891
chr16 17543224 17543594 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108186258
chr16 17543254 17543264 ETV6 JASPAR yes 9810596
chr16 17543254 17543264 ETV6 JASPAR yes 49351070
chr16 17543254 17543268 SPI1 JASPAR yes 9810597
chr16 17543254 17543268 SPI1 JASPAR yes 49351071
chr16 17543258 17543271 TFAP2A JASPAR yes 9810598
chr16 17543258 17543271 TFAP2B JASPAR yes 9810599
chr16 17543258 17543271 TFAP2C JASPAR yes 9810600
chr16 17543258 17543271 TFAP2A JASPAR yes 49351072
chr16 17543258 17543271 TFAP2B JASPAR yes 49351073
chr16 17543258 17543271 TFAP2C JASPAR yes 49351074
Genes associated with rs143886477[chr16:17543258], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More