EnhancerDB
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  3. vista23330[chr16:85606114-85606473]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23330[chr16:85606114-85606473]
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Tissue distribution of vista23330
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Transcription factor that possibly regulate vista23330[chr16:85606114-85606473]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216345
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216346
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216347
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216348
chr16 85606097 85606117 RREB1 JASPAR yes 12078417
chr16 85606097 85606117 RREB1 JASPAR yes 49409654
chr16 85606100 85606120 RREB1 JASPAR yes 12078418
chr16 85606100 85606120 RREB1 JASPAR yes 49409655
chr16 85606102 85606122 RREB1 JASPAR yes 12078421
chr16 85606102 85606122 RREB1 JASPAR yes 49409656
chr16 85606103 85606118 RUNX2 JASPAR yes 12078422
chr16 85606103 85606118 RUNX2 JASPAR yes 49409657
chr16 85606104 85606124 RREB1 JASPAR yes 12078423
chr16 85606104 85606124 RREB1 JASPAR yes 49409658
chr16 85606106 85606126 RREB1 JASPAR yes 12078424
chr16 85606106 85606126 RREB1 JASPAR yes 49409659
chr16 85606109 85606129 RREB1 JASPAR yes 12078425
chr16 85606109 85606129 RREB1 JASPAR yes 49409660
chr16 85606111 85606131 RREB1 JASPAR yes 12078426
chr16 85606111 85606131 RREB1 JASPAR yes 49409661
chr16 85606112 85606127 RUNX2 JASPAR yes 12078427
chr16 85606112 85606127 RUNX2 JASPAR yes 49409662
chr16 85606113 85606133 RREB1 JASPAR yes 12078428
chr16 85606113 85606133 RREB1 JASPAR yes 49409663
chr16 85606122 85606142 RREB1 JASPAR yes 12078429
chr16 85606122 85606142 RREB1 JASPAR yes 49409664
chr16 85606138 85606148 CLOCK JASPAR yes 12078430
chr16 85606138 85606148 HEY1 JASPAR yes 12078431
chr16 85606138 85606148 MNT JASPAR yes 12078432
chr16 85606138 85606148 CLOCK JASPAR yes 49409665
chr16 85606138 85606148 HEY1 JASPAR yes 49409666
chr16 85606138 85606148 MNT JASPAR yes 49409667
chr16 85606140 85606145 MYC TRANSFAC yes 12078433
chr16 85606140 85606145 USF1 TRANSFAC yes 12078434
chr16 85606140 85606145 USF2 TRANSFAC yes 12078435
chr16 85606140 85606145 MYC TRANSFAC yes 49409668
chr16 85606140 85606145 USF1 TRANSFAC yes 49409669
chr16 85606140 85606145 USF2 TRANSFAC yes 49409670
chr16 85606145 85606165 RREB1 JASPAR yes 12078436
chr16 85606145 85606165 RREB1 JASPAR yes 49409671
chr16 85606147 85606167 RREB1 JASPAR yes 12078437
chr16 85606147 85606167 RREB1 JASPAR yes 49409672
chr16 85606152 85606172 RREB1 JASPAR yes 12078438
chr16 85606152 85606172 RREB1 JASPAR yes 49409673
chr16 85606192 85606207 AR JASPAR yes 12078439
chr16 85606192 85606207 AR JASPAR yes 49409674
chr16 85606214 85606221 NFATC2 JASPAR yes 12078440
chr16 85606214 85606221 NFATC2 JASPAR yes 49409675
chr16 85606227 85606237 BARHL2 JASPAR yes 12078441
chr16 85606227 85606237 BARHL2 JASPAR yes 49409676
chr16 85606260 85606275 ZIC4 JASPAR yes 12078442
chr16 85606260 85606275 ZIC4 JASPAR yes 49409677
chr16 85606261 85606275 ZIC1 JASPAR yes 12078443
chr16 85606261 85606275 ZIC1 JASPAR yes 49409678
chr16 85606268 85606279 NFKB1 JASPAR yes 12078444
chr16 85606268 85606279 NFKB1 JASPAR yes 49409679
chr16 85606302 85606308 ETS1 JASPAR yes 12078445
chr16 85606302 85606308 ETS1 JASPAR yes 49409680
chr16 85606308 85606319 NFKB1 JASPAR yes 12078446
chr16 85606308 85606319 NFKB1 JASPAR yes 49409681
chr16 85606326 85606331 SP1 TRANSFAC yes 12078447
chr16 85606326 85606331 SP1 TRANSFAC yes 49409682
chr16 85606327 85606341 ZIC1 JASPAR yes 12078448
chr16 85606327 85606341 ZIC1 JASPAR yes 49409683
chr16 85606327 85606342 ZIC4 JASPAR yes 12078449
chr16 85606327 85606342 ZIC4 JASPAR yes 49409684
chr16 85606346 85606360 PAX6 JASPAR yes 12078450
chr16 85606346 85606360 PAX6 JASPAR yes 49409685
chr16 85606350 85606361 STAT3 JASPAR yes 12078451
chr16 85606350 85606361 STAT3 JASPAR yes 49409686
chr16 85606363 85606381 RARA JASPAR yes 12078452
chr16 85606363 85606381 RARA JASPAR yes 49409687
chr16 85606371 85606388 ESR1 JASPAR yes 12078453
chr16 85606371 85606388 ESR1 JASPAR yes 49409688
chr16 85606372 85606392 ESR1 JASPAR yes 12078454
chr16 85606372 85606392 ESR1 JASPAR yes 49409689
chr16 85606373 85606377 ESR1 TRANSFAC yes 12078455
chr16 85606373 85606377 ESR1 TRANSFAC yes 49409690
chr16 85606373 85606388 RUNX2 JASPAR yes 12078456
chr16 85606373 85606388 RUNX2 JASPAR yes 49409691
chr16 85606383 85606398 STAT1 JASPAR yes 12078457
chr16 85606383 85606398 STAT1 JASPAR yes 49409692
chr16 85606385 85606396 STAT3 JASPAR yes 12078458
chr16 85606385 85606396 STAT3 JASPAR yes 49409693
chr16 85606396 85606404 TBX5 JASPAR yes 12078459
chr16 85606396 85606404 TBX5 JASPAR yes 49409694
chr16 85606402 85606407 SP1 TRANSFAC yes 12078460
chr16 85606402 85606407 SP1 TRANSFAC yes 49409695
chr16 85606422 85606427 ETS2 TRANSFAC yes 12078461
chr16 85606422 85606427 ETS2 TRANSFAC yes 49409696
chr16 85606422 85606430 EHF JASPAR yes 12078462
chr16 85606422 85606430 EHF JASPAR yes 49409697
chr16 85606451 85606464 DUXA JASPAR yes 12078463
chr16 85606451 85606464 DUXA JASPAR yes 49409698
chr16 85606463 85606467 LFA1 TRANSFAC yes 12078464
chr16 85606463 85606467 LFA1 TRANSFAC yes 49409699
SNP sites on vista23330[chr16:85606114-85606473]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 85606117 rs555049488 CCA C
POLR2A RREB1 RUNX2
4625619
chr16 85606133 rs561237714 C G
POLR2A RREB1
4625620
chr16 85606146 rs372074336 GCACACAA G
CLOCK HEY1 MNT POLR2A RREB1
4625621
chr16 85606146 rs543847882 GCACACAA G
CLOCK HEY1 MNT POLR2A RREB1
4625622
chr16 85606207 rs182589528 T C
AR POLR2A
4625623
chr16 85606249 rs559519972 G A
POLR2A
4625624
chr16 85606272 rs149142661 G T
NFKB1 POLR2A ZIC1 ZIC4
4625625
chr16 85606453 rs61693885 T A,C
DUXA
4625626
Genes possibly regulated by vista23330[chr16:85606114-85606473]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr16 85645015 85709810 + GSE1 ENSG00000131149.13 85645015 0.76 1.0 15131 61458
Expression level of Genes
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miRNAs possibly regulated by vista23330[chr16:85606114-85606473]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results