EnhancerDB
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  3. rs555049488[chr16:85606117]
Enhancers that have rs555049488[chr16:85606117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 85606114 85606473 vista23330
VISTA
Transcript factors that have rs555049488[chr16:85606117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216345
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216346
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216347
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216348
chr16 85604890 85609381 TCF7L2 GTRD no Colon (HCT116) 21729632
chr16 85604890 85609381 TCF7L2 GTRD no Colon (HCT116) 108216545
chr16 85604890 85609381 TCF7L2 GTRD no Colon (HCT116) 108216546
chr16 85604890 85609381 TCF7L2 GTRD no Colon (HCT116) 108216547
chr16 85604891 85606189 TCF7L2 GTRD no Colon (HCT116) 21729633
chr16 85604891 85606189 TCF7L2 GTRD no Colon (HCT116) 108216548
chr16 85604891 85606189 TCF7L2 GTRD no Colon (HCT116) 108216549
chr16 85604926 85609576 TCF7L2 GTRD no Colon (HCT116) 21729634
chr16 85604926 85609576 TCF7L2 GTRD no Colon (HCT116) 108216550
chr16 85604926 85609576 TCF7L2 GTRD no Colon (HCT116) 108216551
chr16 85604926 85609576 TCF7L2 GTRD no Colon (HCT116) 108216552
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 21729635
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 108216553
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 108216554
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 108216555
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 108216556
chr16 85605031 85606978 ZNF143 GTRD no Epithelial (MCF-7) 21729636
chr16 85605031 85606978 ZNF143 GTRD no Epithelial (MCF-7) 108216557
chr16 85605031 85606978 ZNF143 GTRD no Epithelial (MCF-7) 108216558
chr16 85605262 85606696 ZNF274 GTRD no Bone Marrow (K562) 21729643
chr16 85605262 85606696 ZNF274 GTRD no Bone Marrow (K562) 108216569
chr16 85605262 85606696 ZNF274 GTRD no Bone Marrow (K562) 108216570
chr16 85605428 85609465 ZNF274 GTRD no Bone Marrow (K562) 21729645
chr16 85605428 85609465 ZNF274 GTRD no Bone Marrow (K562) 108216586
chr16 85605428 85609465 ZNF274 GTRD no Bone Marrow (K562) 108216587
chr16 85605676 85606186 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21729654
chr16 85605676 85606186 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108216588
chr16 85605699 85606139 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729655
chr16 85605699 85606139 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216589
chr16 85605762 85606265 ZNF274 GTRD no Bone Marrow (K562) 21729656
chr16 85605762 85606265 ZNF274 GTRD no Bone Marrow (K562) 108216590
chr16 85605771 85606369 ZNF274 GTRD no Blood (GM12878) 108216591
chr16 85605861 85606131 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729657
chr16 85605861 85606131 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216592
chr16 85605867 85606223 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108216593
chr16 85605879 85606383 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729658
chr16 85605879 85606383 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216594
chr16 85605917 85606327 ZNF274 GTRD no Blood (GM12878) 108216595
chr16 85606001 85606427 ZNF274 GTRD no Bone Marrow (K562) 21729659
chr16 85606001 85606427 ZNF274 GTRD no Bone Marrow (K562) 108216596
chr16 85606065 85607789 TCF7L2 GTRD no Colon (HCT116) 21729660
chr16 85606065 85607789 TCF7L2 GTRD no Colon (HCT116) 108216597
chr16 85606097 85606117 RREB1 JASPAR yes 12078417
chr16 85606097 85606117 RREB1 JASPAR yes 49409654
chr16 85606100 85606120 RREB1 JASPAR yes 12078418
chr16 85606100 85606120 RREB1 JASPAR yes 49409655
chr16 85606102 85606122 RREB1 JASPAR yes 12078421
chr16 85606102 85606122 RREB1 JASPAR yes 49409656
chr16 85606103 85606118 RUNX2 JASPAR yes 12078422
chr16 85606103 85606118 RUNX2 JASPAR yes 49409657
chr16 85606104 85606124 RREB1 JASPAR yes 12078423
chr16 85606104 85606124 RREB1 JASPAR yes 49409658
chr16 85606106 85606126 RREB1 JASPAR yes 12078424
chr16 85606106 85606126 RREB1 JASPAR yes 49409659
chr16 85606109 85606129 RREB1 JASPAR yes 12078425
chr16 85606109 85606129 RREB1 JASPAR yes 49409660
chr16 85606111 85606131 RREB1 JASPAR yes 12078426
chr16 85606111 85606131 RREB1 JASPAR yes 49409661
chr16 85606112 85606127 RUNX2 JASPAR yes 12078427
chr16 85606112 85606127 RUNX2 JASPAR yes 49409662
chr16 85606113 85606133 RREB1 JASPAR yes 12078428
chr16 85606113 85606133 RREB1 JASPAR yes 49409663
Genes associated with rs555049488[chr16:85606117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More