EnhancerDB
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  3. rs559519972[chr16:85606249]
Enhancers that have rs559519972[chr16:85606249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 85606114 85606473 vista23330
VISTA
Transcript factors that have rs559519972[chr16:85606249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216345
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216346
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216347
chr16 85602949 85606418 POLR2A UCSC Txn Factor no Conserved 108216348
chr16 85604890 85609381 TCF7L2 GTRD no Colon (HCT116) 21729632
chr16 85604890 85609381 TCF7L2 GTRD no Colon (HCT116) 108216545
chr16 85604890 85609381 TCF7L2 GTRD no Colon (HCT116) 108216546
chr16 85604890 85609381 TCF7L2 GTRD no Colon (HCT116) 108216547
chr16 85604926 85609576 TCF7L2 GTRD no Colon (HCT116) 21729634
chr16 85604926 85609576 TCF7L2 GTRD no Colon (HCT116) 108216550
chr16 85604926 85609576 TCF7L2 GTRD no Colon (HCT116) 108216551
chr16 85604926 85609576 TCF7L2 GTRD no Colon (HCT116) 108216552
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 21729635
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 108216553
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 108216554
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 108216555
chr16 85605006 85618923 ZNF274 GTRD no Bone Marrow (K562) 108216556
chr16 85605031 85606978 ZNF143 GTRD no Epithelial (MCF-7) 21729636
chr16 85605031 85606978 ZNF143 GTRD no Epithelial (MCF-7) 108216557
chr16 85605031 85606978 ZNF143 GTRD no Epithelial (MCF-7) 108216558
chr16 85605262 85606696 ZNF274 GTRD no Bone Marrow (K562) 21729643
chr16 85605262 85606696 ZNF274 GTRD no Bone Marrow (K562) 108216569
chr16 85605262 85606696 ZNF274 GTRD no Bone Marrow (K562) 108216570
chr16 85605428 85609465 ZNF274 GTRD no Bone Marrow (K562) 21729645
chr16 85605428 85609465 ZNF274 GTRD no Bone Marrow (K562) 108216586
chr16 85605428 85609465 ZNF274 GTRD no Bone Marrow (K562) 108216587
chr16 85605762 85606265 ZNF274 GTRD no Bone Marrow (K562) 21729656
chr16 85605762 85606265 ZNF274 GTRD no Bone Marrow (K562) 108216590
chr16 85605771 85606369 ZNF274 GTRD no Blood (GM12878) 108216591
chr16 85605879 85606383 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21729658
chr16 85605879 85606383 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108216594
chr16 85605917 85606327 ZNF274 GTRD no Blood (GM12878) 108216595
chr16 85606001 85606427 ZNF274 GTRD no Bone Marrow (K562) 21729659
chr16 85606001 85606427 ZNF274 GTRD no Bone Marrow (K562) 108216596
chr16 85606065 85607789 TCF7L2 GTRD no Colon (HCT116) 21729660
chr16 85606065 85607789 TCF7L2 GTRD no Colon (HCT116) 108216597
chr16 85606184 85606946 ZNF143 GTRD no Epithelial (MCF-7) 21729661
chr16 85606184 85606946 ZNF143 GTRD no Epithelial (MCF-7) 108216598
chr16 85606215 85607609 TCF7L2 GTRD no Colon (HCT116) 21729662
chr16 85606215 85607609 TCF7L2 GTRD no Colon (HCT116) 108216599
Genes associated with rs559519972[chr16:85606249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More