EnhancerDB
  1. Home
  2. Enhancers
  3. vista23489[chr16:88340379-88340720]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista23489[chr16:88340379-88340720]
Back to top
Tissue distribution of vista23489
Back to top
Transcription factor that possibly regulate vista23489[chr16:88340379-88340720]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr16 88340397 88340673 CEBPB UCSC Txn Factor no Conserved 108221955
chr16 88340704 88340844 MAFK UCSC Txn Factor no Conserved 108221963
chr16 88340381 88340400 REST JASPAR yes 12276391
chr16 88340381 88340400 REST JASPAR yes 49417042
chr16 88340382 88340392 SP1 JASPAR yes 12276392
chr16 88340382 88340392 SP1 JASPAR yes 49417043
chr16 88340384 88340388 NFE TRANSFAC yes 12276393
chr16 88340384 88340388 NFE TRANSFAC yes 49417044
chr16 88340396 88340408 TAL1 JASPAR yes 12276394
chr16 88340396 88340408 TAL1 JASPAR yes 49417045
chr16 88340398 88340408 OLIG1 JASPAR yes 12276395
chr16 88340398 88340408 OLIG3 JASPAR yes 12276396
chr16 88340398 88340408 OLIG1 JASPAR yes 49417046
chr16 88340398 88340408 OLIG3 JASPAR yes 49417047
chr16 88340398 88340410 TAL1 JASPAR yes 12276397
chr16 88340398 88340410 TAL1 JASPAR yes 49417048
chr16 88340418 88340426 FOXO3 JASPAR yes 12276398
chr16 88340418 88340426 FOXO3 JASPAR yes 49417049
chr16 88340422 88340438 SOX8 JASPAR yes 12276399
chr16 88340422 88340438 SOX8 JASPAR yes 49417050
chr16 88340440 88340452 PKNOX1 JASPAR yes 12276400
chr16 88340440 88340452 PKNOX2 JASPAR yes 12276401
chr16 88340440 88340452 TGIF1 JASPAR yes 12276402
chr16 88340440 88340452 TGIF2 JASPAR yes 12276403
chr16 88340440 88340452 PKNOX1 JASPAR yes 49417051
chr16 88340440 88340452 PKNOX2 JASPAR yes 49417052
chr16 88340440 88340452 TGIF1 JASPAR yes 49417053
chr16 88340440 88340452 TGIF2 JASPAR yes 49417054
chr16 88340440 88340453 ZBTB18 JASPAR yes 12276404
chr16 88340440 88340453 ZBTB18 JASPAR yes 49417055
chr16 88340445 88340457 MEF2A JASPAR yes 12276405
chr16 88340445 88340457 MEF2A JASPAR yes 49417056
chr16 88340449 88340453 YY1 TRANSFAC yes 12276406
chr16 88340449 88340453 YY1 TRANSFAC yes 49417057
chr16 88340457 88340461 TEAD2 TRANSFAC yes 12276407
chr16 88340457 88340461 TEAD2 TRANSFAC yes 49417058
chr16 88340458 88340467 JDP2 JASPAR yes 12276408
chr16 88340458 88340467 JDP2 JASPAR yes 49417059
chr16 88340464 88340481 ZNF410 JASPAR yes 12276409
chr16 88340464 88340481 ZNF410 JASPAR yes 49417060
chr16 88340467 88340478 CDX2 JASPAR yes 12276410
chr16 88340467 88340478 CDX2 JASPAR yes 49417061
chr16 88340469 88340478 CDX1 JASPAR yes 12276411
chr16 88340469 88340478 CDX1 JASPAR yes 49417062
chr16 88340493 88340508 FOXP1 JASPAR yes 12276412
chr16 88340493 88340508 FOXP1 JASPAR yes 49417063
chr16 88340509 88340529 TBX19 JASPAR yes 12276413
chr16 88340509 88340529 TBX19 JASPAR yes 49417064
chr16 88340517 88340528 CEBPA JASPAR yes 12276414
chr16 88340517 88340528 CEBPA JASPAR yes 49417065
chr16 88340517 88340529 HLF JASPAR yes 12276415
chr16 88340517 88340529 HLF JASPAR yes 49417066
chr16 88340518 88340528 CEBPB JASPAR yes 12276416
chr16 88340518 88340528 CEBPD JASPAR yes 12276417
chr16 88340518 88340528 CEBPE JASPAR yes 12276418
chr16 88340518 88340528 CEBPG JASPAR yes 12276419
chr16 88340518 88340528 CEBPB JASPAR yes 49417067
chr16 88340518 88340528 CEBPD JASPAR yes 49417068
chr16 88340518 88340528 CEBPE JASPAR yes 49417069
chr16 88340518 88340528 CEBPG JASPAR yes 49417070
chr16 88340518 88340529 CEBPB JASPAR yes 12276420
chr16 88340518 88340529 CEBPB JASPAR yes 49417071
chr16 88340520 88340534 MTF1 JASPAR yes 12276421
chr16 88340520 88340534 MTF1 JASPAR yes 49417072
chr16 88340536 88340540 NFE TRANSFAC yes 12276422
chr16 88340536 88340540 NFE TRANSFAC yes 49417073
chr16 88340536 88340541 GATA1 TRANSFAC yes 12276423
chr16 88340536 88340541 GATA1 TRANSFAC yes 49417074
chr16 88340536 88340542 GATA3 JASPAR yes 12276424
chr16 88340536 88340542 GATA3 JASPAR yes 49417075
chr16 88340544 88340557 HSF2 JASPAR yes 12276425
chr16 88340544 88340557 HSF2 JASPAR yes 49417076
chr16 88340550 88340565 LEF1 JASPAR yes 12276426
chr16 88340550 88340565 LEF1 JASPAR yes 49417077
chr16 88340551 88340565 GATA2 JASPAR yes 12276427
chr16 88340551 88340565 GATA2 JASPAR yes 49417078
chr16 88340559 88340569 SREBF2 JASPAR yes 12276428
chr16 88340559 88340569 SREBF2 JASPAR yes 49417079
chr16 88340590 88340611 ZNF263 JASPAR yes 12276429
chr16 88340590 88340611 ZNF263 JASPAR yes 49417080
chr16 88340605 88340626 ZNF263 JASPAR yes 12276430
chr16 88340605 88340626 ZNF263 JASPAR yes 49417081
chr16 88340607 88340617 MZF1 JASPAR yes 12276431
chr16 88340607 88340617 MZF1 JASPAR yes 49417082
chr16 88340624 88340641 BCL6B JASPAR yes 12276432
chr16 88340624 88340641 BCL6B JASPAR yes 49417083
chr16 88340625 88340644 RFX2 JASPAR yes 12276433
chr16 88340625 88340644 RFX2 JASPAR yes 49417084
chr16 88340626 88340630 H4TF2 TRANSFAC yes 12276434
chr16 88340626 88340630 H4TF2 TRANSFAC yes 49417085
chr16 88340627 88340642 RFX5 JASPAR yes 12276435
chr16 88340627 88340642 RFX5 JASPAR yes 49417086
chr16 88340640 88340651 FOXH1 JASPAR yes 12276436
chr16 88340640 88340651 FOXH1 JASPAR yes 49417087
chr16 88340641 88340645 H1TF2 TRANSFAC yes 12276437
chr16 88340641 88340645 NFE TRANSFAC yes 12276438
chr16 88340641 88340645 SRF TRANSFAC yes 12276439
chr16 88340641 88340645 H1TF2 TRANSFAC yes 49417088
chr16 88340641 88340645 NFE TRANSFAC yes 49417089
chr16 88340641 88340645 SRF TRANSFAC yes 49417090
chr16 88340644 88340650 ZNF354C JASPAR yes 12276440
chr16 88340644 88340650 ZNF354C JASPAR yes 49417091
chr16 88340646 88340657 ELK4 JASPAR yes 12276441
chr16 88340646 88340657 FLI1 JASPAR yes 12276442
chr16 88340646 88340657 ELK4 JASPAR yes 49417092
chr16 88340646 88340657 FLI1 JASPAR yes 49417093
chr16 88340647 88340657 ERF JASPAR yes 12276443
chr16 88340647 88340657 ETS1 JASPAR yes 12276444
chr16 88340647 88340657 ETV6 JASPAR yes 12276445
chr16 88340647 88340657 GABPA JASPAR yes 12276446
chr16 88340647 88340657 ERF JASPAR yes 49417094
chr16 88340647 88340657 ETS1 JASPAR yes 49417095
chr16 88340647 88340657 ETV6 JASPAR yes 49417096
chr16 88340647 88340657 GABPA JASPAR yes 49417097
chr16 88340647 88340660 ELF1 JASPAR yes 12276447
chr16 88340647 88340660 ELF1 JASPAR yes 49417098
chr16 88340648 88340655 SPI1 JASPAR yes 12276448
chr16 88340648 88340655 SPI1 JASPAR yes 49417099
chr16 88340648 88340656 EHF JASPAR yes 12276449
chr16 88340648 88340656 FEV JASPAR yes 12276450
chr16 88340648 88340656 EHF JASPAR yes 49417100
chr16 88340648 88340656 FEV JASPAR yes 49417101
chr16 88340677 88340681 LFA1 TRANSFAC yes 12276451
chr16 88340677 88340681 LFA1 TRANSFAC yes 49417102
chr16 88340680 88340684 YY1 TRANSFAC yes 12276452
chr16 88340680 88340684 YY1 TRANSFAC yes 49417103
chr16 88340680 88340695 STAT1 JASPAR yes 12276453
chr16 88340680 88340695 STAT1 JASPAR yes 49417104
chr16 88340688 88340694 HiNF-A TRANSFAC yes 12276454
chr16 88340688 88340694 HiNF-A TRANSFAC yes 49417105
chr16 88340692 88340705 JUN JASPAR yes 12276455
chr16 88340692 88340705 JUN JASPAR yes 49417106
chr16 88340694 88340702 RHOXF1 JASPAR yes 12276456
chr16 88340694 88340702 RHOXF1 JASPAR yes 49417107
chr16 88340712 88340726 TCF7L2 JASPAR yes 12276457
chr16 88340712 88340726 TCF7L2 JASPAR yes 49417108
SNP sites on vista23489[chr16:88340379-88340720]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr16 88340392 rs145660793 C T
REST SP1
4661118
chr16 88340398 rs72803415 T C
CEBPB OLIG1 OLIG3 REST TAL1
4661119
chr16 88340595 rs12598415 C G
CEBPB ZNF263
4661120
chr16 88340641 rs558043284 G A,T
BCL6B CEBPB FOXH1 H1TF2 NFE RFX2 RFX5 SRF
4661121
Genes possibly regulated by vista23489[chr16:88340379-88340720]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista23489[chr16:88340379-88340720]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr16 88535392 88535412 + hsa-miR-5189-3p MIMAT0027088 88519687 0.07762875713980635 0.916667 0.0 640
Expression level of miRNAs
Back to top