EnhancerDB
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  3. vista2406[chr1:90372321-90372729]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2406[chr1:90372321-90372729]
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Tissue distribution of vista2406
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Transcription factor that possibly regulate vista2406[chr1:90372321-90372729]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 90372180 90372732 EP300 UCSC Txn Factor no Conserved 107813801
chr1 90372213 90372533 MAFK UCSC Txn Factor no Conserved 107813806
chr1 90372228 90372569 JUND UCSC Txn Factor no Conserved 107813812
chr1 90372234 90372554 BACH1 UCSC Txn Factor no Conserved 107813814
chr1 90372260 90372694 TCF12 UCSC Txn Factor no Conserved 107813822
chr1 90372287 90372471 MAFF UCSC Txn Factor no Conserved 107813830
chr1 90372322 90372327 GATA2 JASPAR yes 30632892
chr1 90372322 90372327 GATA2 JASPAR yes 118326232
chr1 90372357 90372361 ESR1 TRANSFAC yes 30632893
chr1 90372357 90372361 ESR1 TRANSFAC yes 118326233
chr1 90372367 90372385 MAFF JASPAR yes 30632894
chr1 90372367 90372385 MAFF JASPAR yes 118326234
chr1 90372368 90372371 MYB TRANSFAC yes 30632895
chr1 90372368 90372371 MYB TRANSFAC yes 118326235
chr1 90372369 90372380 NRL JASPAR yes 30632896
chr1 90372369 90372380 NRL JASPAR yes 118326236
chr1 90372369 90372384 MAFK JASPAR yes 30632897
chr1 90372369 90372384 MAFK JASPAR yes 118326237
chr1 90372369 90372390 MAFG JASPAR yes 30632898
chr1 90372369 90372390 MAFG JASPAR yes 118326238
chr1 90372370 90372384 JUN JASPAR yes 30632899
chr1 90372370 90372384 JUN JASPAR yes 118326239
chr1 90372373 90372384 JUNB JASPAR yes 30632900
chr1 90372373 90372384 NFE2L2 JASPAR yes 30632901
chr1 90372373 90372384 JUNB JASPAR yes 118326240
chr1 90372373 90372384 NFE2L2 JASPAR yes 118326241
chr1 90372374 90372385 FOS JASPAR yes 30632902
chr1 90372374 90372385 FOSL1 JASPAR yes 30632903
chr1 90372374 90372385 JUND JASPAR yes 30632904
chr1 90372374 90372385 NFE2 JASPAR yes 30632905
chr1 90372374 90372385 FOS JASPAR yes 118326242
chr1 90372374 90372385 FOSL1 JASPAR yes 118326243
chr1 90372374 90372385 JUND JASPAR yes 118326244
chr1 90372374 90372385 NFE2 JASPAR yes 118326245
chr1 90372375 90372384 JDP2 JASPAR yes 30632906
chr1 90372375 90372384 JDP2 JASPAR yes 118326246
chr1 90372375 90372386 FOSL2 JASPAR yes 30632907
chr1 90372375 90372386 JUNB JASPAR yes 30632908
chr1 90372375 90372386 FOSL2 JASPAR yes 118326247
chr1 90372375 90372386 JUNB JASPAR yes 118326248
chr1 90372375 90372389 JUN JASPAR yes 30632909
chr1 90372375 90372389 JUN JASPAR yes 118326249
chr1 90372376 90372387 BATF JASPAR yes 30632910
chr1 90372376 90372387 BATF JASPAR yes 118326250
chr1 90372424 90372438 STAT1 JASPAR yes 30632911
chr1 90372424 90372438 STAT1 JASPAR yes 118326251
chr1 90372431 90372444 ELF1 JASPAR yes 30632912
chr1 90372431 90372444 ELF1 JASPAR yes 118326252
chr1 90372445 90372455 TEAD1 JASPAR yes 30632913
chr1 90372445 90372455 TEAD4 JASPAR yes 30632914
chr1 90372445 90372455 TEAD1 JASPAR yes 118326253
chr1 90372445 90372455 TEAD4 JASPAR yes 118326254
chr1 90372445 90372457 TEAD1 JASPAR yes 30632915
chr1 90372445 90372457 TEAD1 JASPAR yes 118326255
chr1 90372446 90372454 TEAD3 JASPAR yes 30632916
chr1 90372446 90372454 TEAD3 JASPAR yes 118326256
chr1 90372455 90372463 MEIS2 JASPAR yes 30632917
chr1 90372455 90372463 MEIS3 JASPAR yes 30632918
chr1 90372455 90372463 MEIS2 JASPAR yes 118326257
chr1 90372455 90372463 MEIS3 JASPAR yes 118326258
chr1 90372456 90372460 NFE TRANSFAC yes 30632919
chr1 90372456 90372460 NFE TRANSFAC yes 118326259
chr1 90372456 90372463 MEIS1 JASPAR yes 30632920
chr1 90372456 90372463 MEIS1 JASPAR yes 118326260
chr1 90372467 90372471 YY1 TRANSFAC yes 30632921
chr1 90372467 90372471 YY1 TRANSFAC yes 118326261
chr1 90372479 90372493 GLIS2 JASPAR yes 30632922
chr1 90372479 90372493 GLIS3 JASPAR yes 30632923
chr1 90372479 90372493 GLIS2 JASPAR yes 118326262
chr1 90372479 90372493 GLIS3 JASPAR yes 118326263
chr1 90372501 90372506 ETS2 TRANSFAC yes 30632924
chr1 90372501 90372506 ETS2 TRANSFAC yes 118326264
chr1 90372513 90372527 TLX1 JASPAR yes 30632925
chr1 90372513 90372527 TLX1 JASPAR yes 118326265
chr1 90372536 90372547 DMRT3 JASPAR yes 30632926
chr1 90372536 90372547 DMRT3 JASPAR yes 118326266
chr1 90372565 90372574 NKX2-8 JASPAR yes 30632927
chr1 90372565 90372574 NKX2-8 JASPAR yes 118326267
chr1 90372565 90372575 NKX2-3 JASPAR yes 30632928
chr1 90372565 90372575 NKX2-3 JASPAR yes 118326268
chr1 90372600 90372603 MYB TRANSFAC yes 30632929
chr1 90372600 90372603 MYB TRANSFAC yes 118326269
chr1 90372620 90372638 MAFF JASPAR yes 30632930
chr1 90372620 90372638 MAFF JASPAR yes 118326270
chr1 90372621 90372636 MAFK JASPAR yes 30632931
chr1 90372621 90372636 MAFK JASPAR yes 118326271
chr1 90372623 90372627 NFE TRANSFAC yes 30632932
chr1 90372623 90372627 NFE TRANSFAC yes 118326272
chr1 90372625 90372636 NRL JASPAR yes 30632933
chr1 90372625 90372636 NRL JASPAR yes 118326273
chr1 90372630 90372634 YY1 TRANSFAC yes 30632934
chr1 90372630 90372634 YY1 TRANSFAC yes 118326274
chr1 90372632 90372649 PAX1 JASPAR yes 30632935
chr1 90372632 90372649 PAX9 JASPAR yes 30632936
chr1 90372632 90372649 PAX1 JASPAR yes 118326275
chr1 90372632 90372649 PAX9 JASPAR yes 118326276
chr1 90372642 90372650 EHF JASPAR yes 30632937
chr1 90372642 90372650 EHF JASPAR yes 118326277
chr1 90372649 90372662 POU2F2 JASPAR yes 30632938
chr1 90372649 90372662 POU2F2 JASPAR yes 118326278
chr1 90372651 90372655 YY1 TRANSFAC yes 30632939
chr1 90372651 90372655 YY1 TRANSFAC yes 118326279
chr1 90372657 90372668 DMRT3 JASPAR yes 30632940
chr1 90372657 90372668 DMRT3 JASPAR yes 118326280
chr1 90372676 90372682 SOX10 JASPAR yes 30632941
chr1 90372676 90372682 SOX10 JASPAR yes 118326281
chr1 90372681 90372695 PLAG1 JASPAR yes 30632942
chr1 90372681 90372695 PLAG1 JASPAR yes 118326282
chr1 90372682 90372686 H4TF2 TRANSFAC yes 30632943
chr1 90372682 90372686 H4TF2 TRANSFAC yes 118326283
chr1 90372690 90372701 NFKB1 JASPAR yes 30632944
chr1 90372690 90372701 NFKB1 JASPAR yes 118326284
chr1 90372702 90372706 NFE TRANSFAC yes 30632945
chr1 90372702 90372706 NFE TRANSFAC yes 118326285
chr1 90372702 90372707 GATA1 TRANSFAC yes 30632946
chr1 90372702 90372707 GATA1 TRANSFAC yes 118326286
chr1 90372702 90372708 GATA3 JASPAR yes 30632947
chr1 90372702 90372708 GATA3 JASPAR yes 118326287
chr1 90372708 90372718 FIGLA JASPAR yes 30632948
chr1 90372708 90372718 FIGLA JASPAR yes 118326288
chr1 90372718 90372729 ELK4 JASPAR yes 30632949
chr1 90372718 90372729 FLI1 JASPAR yes 30632950
chr1 90372718 90372729 ELK4 JASPAR yes 118326289
chr1 90372718 90372729 FLI1 JASPAR yes 118326290
chr1 90372719 90372729 GABPA JASPAR yes 30632951
chr1 90372719 90372729 GABPA JASPAR yes 118326291
chr1 90372719 90372732 ELF1 JASPAR yes 30632952
chr1 90372719 90372732 ELF1 JASPAR yes 118326292
chr1 90372725 90372729 NFE TRANSFAC yes 30632953
chr1 90372725 90372729 NFE TRANSFAC yes 118326293
SNP sites on vista2406[chr1:90372321-90372729]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 90372347 rs147608973 C A
BACH1 EP300 JUND MAFF MAFK TCF12
472205
chr1 90372352 rs114983867 G A
BACH1 EP300 JUND MAFF MAFK TCF12
472206
chr1 90372408 rs151027237 GC G
BACH1 EP300 JUND MAFF MAFK TCF12
472207
chr1 90372443 rs149094606 C T
BACH1 ELF1 EP300 JUND MAFF MAFK TCF12
472208
chr1 90372587 rs6671573 A C
EP300 TCF12
472209
chr1 90372656 rs79094904 T C
EP300 POU2F2 TCF12
472210
chr1 90372717 rs2801996 T C
EP300 FIGLA
472211
Genes possibly regulated by vista2406[chr1:90372321-90372729]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 90286573 90402170 + LRRC8D ENSG00000171492.10 90286573 0.82 0.98 884 14252
chr1 90460671 90501090 + ZNF326 ENSG00000162664.12 90460671 0.86 0.98 885 12058
Expression level of Genes
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miRNAs possibly regulated by vista2406[chr1:90372321-90372729]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results