EnhancerDB
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Enhancers that have rs6671573[chr1:90372587]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90347765 90388035 enh484
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 90372321 90372729 vista2406
VISTA
Transcript factors that have rs6671573[chr1:90372587]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90372099 90372655 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107813791
chr1 90372104 90372694 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107813792
chr1 90372164 90372668 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813797
chr1 90372168 90372688 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813798
chr1 90372180 90372732 EP300 UCSC Txn Factor no Conserved 107813801
chr1 90372180 90372732 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813802
chr1 90372186 90372642 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107813804
chr1 90372186 90372670 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813805
chr1 90372213 90372697 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813808
chr1 90372260 90372694 TCF12 UCSC Txn Factor no Conserved 107813822
chr1 90372260 90372694 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813823
chr1 90372263 90372603 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813824
chr1 90372273 90372637 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107813826
chr1 90372273 90372713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107813827
chr1 90372299 90372609 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107813833
Genes associated with rs6671573[chr1:90372587], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More