EnhancerDB
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  3. rs2801996[chr1:90372717]
Enhancers that have rs2801996[chr1:90372717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90347765 90388035 enh484
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 90372321 90372729 vista2406
VISTA
Transcript factors that have rs2801996[chr1:90372717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90372180 90372732 EP300 UCSC Txn Factor no Conserved 107813801
chr1 90372180 90372732 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813802
chr1 90372708 90372718 FIGLA JASPAR yes 30632948
chr1 90372708 90372718 FIGLA JASPAR yes 118326288
Genes associated with rs2801996[chr1:90372717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More