EnhancerDB
  1. Home
  2. Enhancers
  3. vista24347[chr17:27966112-27966641]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24347[chr17:27966112-27966641]
Back to top
Tissue distribution of vista24347
Back to top
Transcription factor that possibly regulate vista24347[chr17:27966112-27966641]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 27966462 27966925 CTCF UCSC Txn Factor no Conserved 108247377
chr17 27966591 27966866 SMC3 UCSC Txn Factor no Conserved 108247388
chr17 27966596 27966860 RAD21 UCSC Txn Factor no Conserved 108247391
chr17 27966135 27966149 ONECUT1 JASPAR yes 21215767
chr17 27966135 27966149 ONECUT2 JASPAR yes 21215768
chr17 27966135 27966149 ONECUT3 JASPAR yes 21215769
chr17 27966135 27966149 ONECUT1 JASPAR yes 53744235
chr17 27966135 27966149 ONECUT2 JASPAR yes 53744236
chr17 27966135 27966149 ONECUT3 JASPAR yes 53744237
chr17 27966142 27966146 YY1 TRANSFAC yes 21215770
chr17 27966142 27966146 YY1 TRANSFAC yes 53744238
chr17 27966155 27966165 MAX JASPAR yes 21215771
chr17 27966155 27966165 MAX JASPAR yes 53744239
chr17 27966155 27966167 HES5 JASPAR yes 21215772
chr17 27966155 27966167 HES5 JASPAR yes 53744240
chr17 27966156 27966166 CLOCK JASPAR yes 21215773
chr17 27966156 27966166 HEY1 JASPAR yes 21215774
chr17 27966156 27966166 HEY2 JASPAR yes 21215775
chr17 27966156 27966166 MNT JASPAR yes 21215776
chr17 27966156 27966166 CLOCK JASPAR yes 53744241
chr17 27966156 27966166 HEY1 JASPAR yes 53744242
chr17 27966156 27966166 HEY2 JASPAR yes 53744243
chr17 27966156 27966166 MNT JASPAR yes 53744244
chr17 27966158 27966163 MYC TRANSFAC yes 21215777
chr17 27966158 27966163 USF1 TRANSFAC yes 21215778
chr17 27966158 27966163 USF2 TRANSFAC yes 21215779
chr17 27966158 27966163 MYC TRANSFAC yes 53744245
chr17 27966158 27966163 USF1 TRANSFAC yes 53744246
chr17 27966158 27966163 USF2 TRANSFAC yes 53744247
chr17 27966158 27966165 USF1 JASPAR yes 21215780
chr17 27966158 27966165 USF1 JASPAR yes 53744248
chr17 27966160 27966170 NFATC3 JASPAR yes 21215781
chr17 27966160 27966170 NFATC3 JASPAR yes 53744249
chr17 27966162 27966169 NFATC2 JASPAR yes 21215782
chr17 27966162 27966169 NFATC2 JASPAR yes 53744250
chr17 27966168 27966180 NHLH1 JASPAR yes 21215783
chr17 27966168 27966180 NHLH1 JASPAR yes 53744251
chr17 27966169 27966178 SNAI2 JASPAR yes 21215784
chr17 27966169 27966178 SNAI2 JASPAR yes 53744252
chr17 27966169 27966179 TCF3 JASPAR yes 21215785
chr17 27966169 27966179 TCF4 JASPAR yes 21215786
chr17 27966169 27966179 TCF3 JASPAR yes 53744253
chr17 27966169 27966179 TCF4 JASPAR yes 53744254
chr17 27966171 27966180 ZEB1 JASPAR yes 21215787
chr17 27966171 27966180 ZEB1 JASPAR yes 53744255
chr17 27966173 27966178 SP1 TRANSFAC yes 21215788
chr17 27966173 27966178 SP1 TRANSFAC yes 53744256
chr17 27966181 27966191 GABPA JASPAR yes 21215789
chr17 27966181 27966191 GABPA JASPAR yes 53744257
chr17 27966182 27966187 ETS2 TRANSFAC yes 21215790
chr17 27966182 27966187 ETS2 TRANSFAC yes 53744258
chr17 27966184 27966195 NFKB1 JASPAR yes 21215791
chr17 27966184 27966195 NFKB1 JASPAR yes 53744259
chr17 27966192 27966198 SP1 TRANSFAC yes 21215792
chr17 27966192 27966198 SP1 TRANSFAC yes 53744260
chr17 27966204 27966208 YY1 TRANSFAC yes 21215793
chr17 27966204 27966208 YY1 TRANSFAC yes 53744261
chr17 27966210 27966216 TCF4 TRANSFAC yes 21215794
chr17 27966210 27966216 TCF4 TRANSFAC yes 53744262
chr17 27966215 27966230 NR2C2 JASPAR yes 21215795
chr17 27966215 27966230 NR2C2 JASPAR yes 53744263
chr17 27966236 27966241 H4TF1 TRANSFAC yes 21215796
chr17 27966236 27966241 H4TF1 TRANSFAC yes 53744264
chr17 27966241 27966245 YY1 TRANSFAC yes 21215797
chr17 27966241 27966245 YY1 TRANSFAC yes 53744265
chr17 27966246 27966261 RUNX2 JASPAR yes 21215798
chr17 27966246 27966261 RUNX2 JASPAR yes 53744266
chr17 27966247 27966256 RUNX2 JASPAR yes 21215799
chr17 27966247 27966256 RUNX2 JASPAR yes 53744267
chr17 27966247 27966257 RUNX3 JASPAR yes 21215800
chr17 27966247 27966257 RUNX3 JASPAR yes 53744268
chr17 27966274 27966286 INSM1 JASPAR yes 21215801
chr17 27966274 27966286 INSM1 JASPAR yes 53744269
chr17 27966304 27966310 TCF4 TRANSFAC yes 21215802
chr17 27966304 27966310 TCF4 TRANSFAC yes 53744270
chr17 27966310 27966330 ESR1 JASPAR yes 21215803
chr17 27966310 27966330 ESR1 JASPAR yes 53744271
chr17 27966311 27966315 ESR1 TRANSFAC yes 21215804
chr17 27966311 27966315 ESR1 TRANSFAC yes 53744272
chr17 27966332 27966342 RORA JASPAR yes 21215805
chr17 27966332 27966342 RORA JASPAR yes 53744273
chr17 27966337 27966341 ESR1 TRANSFAC yes 21215806
chr17 27966337 27966341 ESR1 TRANSFAC yes 53744274
chr17 27966343 27966350 NKX3-1 JASPAR yes 21215807
chr17 27966343 27966350 NKX3-1 JASPAR yes 53744275
chr17 27966350 27966354 H4TF2 TRANSFAC yes 21215808
chr17 27966350 27966354 H4TF2 TRANSFAC yes 53744276
chr17 27966356 27966371 RUNX2 JASPAR yes 21215809
chr17 27966356 27966371 RUNX2 JASPAR yes 53744277
chr17 27966359 27966379 ESR1 JASPAR yes 21215810
chr17 27966359 27966379 ESR1 JASPAR yes 53744278
chr17 27966400 27966409 RUNX2 JASPAR yes 21215811
chr17 27966400 27966409 RUNX2 JASPAR yes 53744279
chr17 27966400 27966410 RUNX3 JASPAR yes 21215812
chr17 27966400 27966410 RUNX3 JASPAR yes 53744280
chr17 27966400 27966415 ZIC3 JASPAR yes 21215813
chr17 27966400 27966415 ZIC4 JASPAR yes 21215814
chr17 27966400 27966415 ZIC3 JASPAR yes 53744281
chr17 27966400 27966415 ZIC4 JASPAR yes 53744282
chr17 27966401 27966415 ZIC1 JASPAR yes 21215815
chr17 27966401 27966415 ZIC1 JASPAR yes 53744283
chr17 27966412 27966426 STAT1 JASPAR yes 21215816
chr17 27966412 27966426 STAT1 JASPAR yes 53744284
chr17 27966412 27966427 STAT2 JASPAR yes 21215817
chr17 27966412 27966427 STAT2 JASPAR yes 53744285
chr17 27966418 27966428 RELA JASPAR yes 21215818
chr17 27966418 27966428 RELA JASPAR yes 53744286
chr17 27966440 27966451 TFAP2C JASPAR yes 21215819
chr17 27966440 27966451 TFAP2C JASPAR yes 53744287
chr17 27966441 27966450 TFAP2A JASPAR yes 21215820
chr17 27966441 27966450 TFAP2A JASPAR yes 53744288
chr17 27966445 27966459 TLX1 JASPAR yes 21215821
chr17 27966445 27966459 TLX1 JASPAR yes 53744289
chr17 27966448 27966457 TFAP2A JASPAR yes 21215822
chr17 27966448 27966457 TFAP2A JASPAR yes 53744290
chr17 27966454 27966471 PAX1 JASPAR yes 21215823
chr17 27966454 27966471 PAX9 JASPAR yes 21215824
chr17 27966454 27966471 PAX1 JASPAR yes 53744291
chr17 27966454 27966471 PAX9 JASPAR yes 53744292
chr17 27966470 27966481 NFE2L2 JASPAR yes 21215825
chr17 27966470 27966481 NFE2L2 JASPAR yes 53744293
chr17 27966494 27966502 HOXA5 JASPAR yes 21215826
chr17 27966494 27966502 HOXA5 JASPAR yes 53744294
chr17 27966510 27966521 FOXA1 JASPAR yes 21215827
chr17 27966510 27966521 FOXA1 JASPAR yes 53744295
chr17 27966519 27966534 NR2C2 JASPAR yes 21215828
chr17 27966519 27966534 NR2C2 JASPAR yes 53744296
chr17 27966521 27966537 SOX4 JASPAR yes 21215829
chr17 27966521 27966537 SOX4 JASPAR yes 53744297
chr17 27966526 27966536 ID4 JASPAR yes 21215830
chr17 27966526 27966536 TCF3 JASPAR yes 21215831
chr17 27966526 27966536 TCF4 JASPAR yes 21215832
chr17 27966526 27966536 ID4 JASPAR yes 53744298
chr17 27966526 27966536 TCF3 JASPAR yes 53744299
chr17 27966526 27966536 TCF4 JASPAR yes 53744300
chr17 27966527 27966536 SNAI2 JASPAR yes 21215833
chr17 27966527 27966536 SNAI2 JASPAR yes 53744301
chr17 27966528 27966533 USF2 TRANSFAC yes 21215834
chr17 27966528 27966533 USF2 TRANSFAC yes 53744302
chr17 27966538 27966557 CTCF JASPAR yes 21215835
chr17 27966538 27966557 CTCF JASPAR yes 53744303
chr17 27966541 27966553 INSM1 JASPAR yes 21215836
chr17 27966541 27966553 INSM1 JASPAR yes 53744304
chr17 27966547 27966560 SMAD2 JASPAR yes 21215837
chr17 27966547 27966560 SMAD2 JASPAR yes 53744305
chr17 27966551 27966555 NFE TRANSFAC yes 21215838
chr17 27966551 27966555 NFE TRANSFAC yes 53744306
chr17 27966565 27966570 SP1 TRANSFAC yes 21215839
chr17 27966565 27966570 SP1 TRANSFAC yes 53744307
chr17 27966577 27966588 FOS JASPAR yes 21215840
chr17 27966577 27966588 FOSL1 JASPAR yes 21215841
chr17 27966577 27966588 JUND JASPAR yes 21215842
chr17 27966577 27966588 FOS JASPAR yes 53744308
chr17 27966577 27966588 FOSL1 JASPAR yes 53744309
chr17 27966577 27966588 JUND JASPAR yes 53744310
chr17 27966578 27966587 JDP2 JASPAR yes 21215843
chr17 27966578 27966587 JDP2 JASPAR yes 53744311
chr17 27966578 27966589 FOSL2 JASPAR yes 21215844
chr17 27966578 27966589 JUNB JASPAR yes 21215845
chr17 27966578 27966589 FOSL2 JASPAR yes 53744312
chr17 27966578 27966589 JUNB JASPAR yes 53744313
chr17 27966578 27966592 JUN JASPAR yes 21215846
chr17 27966578 27966592 JUN JASPAR yes 53744314
chr17 27966579 27966590 BATF JASPAR yes 21215847
chr17 27966579 27966590 BATF JASPAR yes 53744315
chr17 27966603 27966613 REL JASPAR yes 21215848
chr17 27966603 27966613 REL JASPAR yes 53744316
chr17 27966609 27966620 STAT3 JASPAR yes 21215849
chr17 27966609 27966620 STAT3 JASPAR yes 53744317
chr17 27966614 27966619 ETS2 TRANSFAC yes 21215850
chr17 27966614 27966619 ETS2 TRANSFAC yes 53744318
chr17 27966625 27966629 ESR1 TRANSFAC yes 21215851
chr17 27966625 27966629 ESR1 TRANSFAC yes 53744319
SNP sites on vista24347[chr17:27966112-27966641]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 27966145 rs115831272 T C
ONECUT1 ONECUT2 ONECUT3 YY1
4817451
chr17 27966161 rs141702280 C A,G,T
CLOCK HES5 HEY1 HEY2 MAX MNT MYC NFATC3 USF1 USF2
4817452
chr17 27966297 rs147067944 G A no 4817453
chr17 27966404 rs73987114 C T
RUNX2 RUNX3 ZIC1 ZIC3 ZIC4
4817454
chr17 27966548 rs529593476 CT C
CTCF INSM1 SMAD2
4817455
chr17 27966592 rs150192584 G A
CTCF JUN SMC3
4817456
Genes possibly regulated by vista24347[chr17:27966112-27966641]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 27887565 27894155 - ABHD15 ENSG00000168792.4 27894155 0.66 0.99 15600 28043
chr17 27893070 27900175 + TP53I13 ENSG00000167543.11 27893070 0.6 1.0 15601 26958
chr17 27900487 27921072 - GIT1 ENSG00000108262.11 27921072 0.72 1.0 15602 54960
chr17 27916787 27941779 + ANKRD13B ENSG00000198720.8 27916787 0.8 1.0 15603 50675
chr17 27941774 27949925 - CORO6 ENSG00000167549.14 27949925 0.94 1.0 15604 83813
Expression level of Genes
Back to top
miRNAs possibly regulated by vista24347[chr17:27966112-27966641]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results