EnhancerDB
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  3. rs115831272[chr17:27966145]
Enhancers that have rs115831272[chr17:27966145]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 27966112 27966641 vista24347
VISTA
Transcript factors that have rs115831272[chr17:27966145]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27966135 27966149 ONECUT1 JASPAR yes 21215767
chr17 27966135 27966149 ONECUT2 JASPAR yes 21215768
chr17 27966135 27966149 ONECUT3 JASPAR yes 21215769
chr17 27966135 27966149 ONECUT1 JASPAR yes 53744235
chr17 27966135 27966149 ONECUT2 JASPAR yes 53744236
chr17 27966135 27966149 ONECUT3 JASPAR yes 53744237
chr17 27966142 27966146 YY1 TRANSFAC yes 21215770
chr17 27966142 27966146 YY1 TRANSFAC yes 53744238
Genes associated with rs115831272[chr17:27966145], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More