EnhancerDB
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  3. rs141702280[chr17:27966161]
Enhancers that have rs141702280[chr17:27966161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 27963570 27975125 enh4328
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
chr17 27966112 27966641 vista24347
VISTA
Transcript factors that have rs141702280[chr17:27966161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 27966155 27966165 MAX JASPAR yes 21215771
chr17 27966155 27966165 MAX JASPAR yes 53744239
chr17 27966155 27966167 HES5 JASPAR yes 21215772
chr17 27966155 27966167 HES5 JASPAR yes 53744240
chr17 27966156 27966166 CLOCK JASPAR yes 21215773
chr17 27966156 27966166 HEY1 JASPAR yes 21215774
chr17 27966156 27966166 HEY2 JASPAR yes 21215775
chr17 27966156 27966166 MNT JASPAR yes 21215776
chr17 27966156 27966166 CLOCK JASPAR yes 53744241
chr17 27966156 27966166 HEY1 JASPAR yes 53744242
chr17 27966156 27966166 HEY2 JASPAR yes 53744243
chr17 27966156 27966166 MNT JASPAR yes 53744244
chr17 27966158 27966163 MYC TRANSFAC yes 21215777
chr17 27966158 27966163 USF1 TRANSFAC yes 21215778
chr17 27966158 27966163 USF2 TRANSFAC yes 21215779
chr17 27966158 27966163 MYC TRANSFAC yes 53744245
chr17 27966158 27966163 USF1 TRANSFAC yes 53744246
chr17 27966158 27966163 USF2 TRANSFAC yes 53744247
chr17 27966158 27966165 USF1 JASPAR yes 21215780
chr17 27966158 27966165 USF1 JASPAR yes 53744248
chr17 27966160 27966170 NFATC3 JASPAR yes 21215781
chr17 27966160 27966170 NFATC3 JASPAR yes 53744249
Genes associated with rs141702280[chr17:27966161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More