EnhancerDB
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  3. vista24712[chr17:38502716-38503032]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista24712[chr17:38502716-38503032]
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Tissue distribution of vista24712
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Transcription factor that possibly regulate vista24712[chr17:38502716-38503032]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 38502703 38502717 RORA JASPAR yes 21234669
chr17 38502703 38502717 RORA JASPAR yes 54208550
chr17 38502715 38502733 ESR2 JASPAR yes 21234670
chr17 38502715 38502733 ESR2 JASPAR yes 54208551
chr17 38502715 38502735 PPARG JASPAR yes 21234671
chr17 38502715 38502735 PPARG JASPAR yes 54208552
chr17 38502717 38502732 ESR2 JASPAR yes 21234672
chr17 38502717 38502732 ESR2 JASPAR yes 54208553
chr17 38502724 38502728 H4TF2 TRANSFAC yes 21234673
chr17 38502724 38502728 H4TF2 TRANSFAC yes 54208554
chr17 38502728 38502748 RREB1 JASPAR yes 21234674
chr17 38502728 38502748 RREB1 JASPAR yes 54208555
chr17 38502729 38502749 RREB1 JASPAR yes 21234675
chr17 38502729 38502749 RREB1 JASPAR yes 54208556
chr17 38502744 38502756 INSM1 JASPAR yes 21234676
chr17 38502744 38502756 INSM1 JASPAR yes 54208557
chr17 38502746 38502767 ZNF263 JASPAR yes 21234677
chr17 38502746 38502767 ZNF263 JASPAR yes 54208558
chr17 38502750 38502761 ESRRA JASPAR yes 21234678
chr17 38502750 38502761 ESRRB JASPAR yes 21234679
chr17 38502750 38502761 ESRRA JASPAR yes 54208559
chr17 38502750 38502761 ESRRB JASPAR yes 54208560
chr17 38502751 38502766 LEF1 JASPAR yes 21234680
chr17 38502751 38502766 LEF1 JASPAR yes 54208561
chr17 38502761 38502771 MZF1 JASPAR yes 21234681
chr17 38502761 38502771 MZF1 JASPAR yes 54208562
chr17 38502764 38502770 SP1 TRANSFAC yes 21234682
chr17 38502764 38502770 SP1 TRANSFAC yes 54208563
chr17 38502764 38502774 SP1 JASPAR yes 21234683
chr17 38502764 38502774 SP1 JASPAR yes 54208564
chr17 38502765 38502775 SP1 JASPAR yes 21234684
chr17 38502765 38502775 SP1 JASPAR yes 54208565
chr17 38502767 38502777 ZNF740 JASPAR yes 21234685
chr17 38502767 38502777 ZNF740 JASPAR yes 54208566
chr17 38502790 38502799 SOX9 JASPAR yes 21234686
chr17 38502790 38502799 SOX9 JASPAR yes 54208567
chr17 38502811 38502821 NFATC3 JASPAR yes 21234687
chr17 38502811 38502821 NFATC3 JASPAR yes 54208568
chr17 38502813 38502820 NFATC2 JASPAR yes 21234688
chr17 38502813 38502820 NFATC2 JASPAR yes 54208569
chr17 38502825 38502839 TCF7L2 JASPAR yes 21234689
chr17 38502825 38502839 TCF7L2 JASPAR yes 54208570
chr17 38502830 38502836 SOX10 JASPAR yes 21234690
chr17 38502830 38502836 SOX10 JASPAR yes 54208571
chr17 38502841 38502847 SOX10 JASPAR yes 21234691
chr17 38502841 38502847 SOX10 JASPAR yes 54208572
chr17 38502872 38502886 PLAG1 JASPAR yes 21234692
chr17 38502872 38502886 PLAG1 JASPAR yes 54208573
chr17 38502880 38502890 ZNF740 JASPAR yes 21234693
chr17 38502880 38502890 ZNF740 JASPAR yes 54208574
chr17 38502881 38502901 RREB1 JASPAR yes 21234694
chr17 38502881 38502901 RREB1 JASPAR yes 54208575
chr17 38502882 38502902 RREB1 JASPAR yes 21234695
chr17 38502882 38502902 RREB1 JASPAR yes 54208576
chr17 38502883 38502903 RREB1 JASPAR yes 21234696
chr17 38502883 38502903 RREB1 JASPAR yes 54208577
chr17 38502884 38502904 RREB1 JASPAR yes 21234697
chr17 38502884 38502904 RREB1 JASPAR yes 54208578
chr17 38502888 38502896 SP1 TRANSFAC yes 21234698
chr17 38502888 38502896 SP1 TRANSFAC yes 54208579
chr17 38502888 38502898 SP1 JASPAR yes 21234699
chr17 38502888 38502898 SP1 JASPAR yes 54208580
chr17 38502889 38502895 SP1 TRANSFAC yes 21234700
chr17 38502889 38502895 SP1 TRANSFAC yes 54208581
chr17 38502889 38502899 SP1 JASPAR yes 21234701
chr17 38502889 38502899 SP1 JASPAR yes 54208582
chr17 38502890 38502897 SP1 TRANSFAC yes 21234702
chr17 38502890 38502897 SP1 TRANSFAC yes 54208583
chr17 38502891 38502896 SP1 TRANSFAC yes 21234703
chr17 38502891 38502896 SP1 TRANSFAC yes 54208584
chr17 38502891 38502897 SP1 TRANSFAC yes 21234704
chr17 38502891 38502897 SP1 TRANSFAC yes 54208585
chr17 38502891 38502898 SP1 TRANSFAC yes 21234705
chr17 38502891 38502898 SP1 TRANSFAC yes 54208586
chr17 38502893 38502903 ZNF740 JASPAR yes 21234706
chr17 38502893 38502903 ZNF740 JASPAR yes 54208587
chr17 38502900 38502912 NHLH1 JASPAR yes 21234707
chr17 38502900 38502912 NHLH1 JASPAR yes 54208588
chr17 38502901 38502911 MSC JASPAR yes 21234708
chr17 38502901 38502911 MYF6 JASPAR yes 21234709
chr17 38502901 38502911 NHLH1 JASPAR yes 21234710
chr17 38502901 38502911 TFAP4 JASPAR yes 21234711
chr17 38502901 38502911 MSC JASPAR yes 54208589
chr17 38502901 38502911 MYF6 JASPAR yes 54208590
chr17 38502901 38502911 NHLH1 JASPAR yes 54208591
chr17 38502901 38502911 TFAP4 JASPAR yes 54208592
chr17 38502901 38502913 TAL1 JASPAR yes 21234712
chr17 38502901 38502913 TAL1 JASPAR yes 54208593
chr17 38502926 38502930 NFE TRANSFAC yes 21234713
chr17 38502926 38502930 NFE TRANSFAC yes 54208594
chr17 38502944 38502959 TFAP2C JASPAR yes 21234714
chr17 38502944 38502959 TFAP2C JASPAR yes 54208595
chr17 38502949 38502954 TFAP2A TRANSFAC yes 21234715
chr17 38502949 38502954 TFAP2A TRANSFAC yes 54208596
chr17 38502949 38502955 MZF1 JASPAR yes 21234716
chr17 38502949 38502955 MZF1 JASPAR yes 54208597
chr17 38502949 38502970 ZNF263 JASPAR yes 21234717
chr17 38502949 38502970 ZNF263 JASPAR yes 54208598
chr17 38502952 38502973 ZNF263 JASPAR yes 21234718
chr17 38502952 38502973 ZNF263 JASPAR yes 54208599
chr17 38502960 38502968 TBX15 JASPAR yes 21234719
chr17 38502960 38502968 TBX15 JASPAR yes 54208600
chr17 38502961 38502966 SP1 TRANSFAC yes 21234720
chr17 38502961 38502966 SP1 TRANSFAC yes 54208601
chr17 38502981 38502985 LFA1 TRANSFAC yes 21234721
chr17 38502981 38502985 LFA1 TRANSFAC yes 54208602
chr17 38502981 38503001 RREB1 JASPAR yes 21234722
chr17 38502981 38503001 RREB1 JASPAR yes 54208603
chr17 38502984 38502989 MYC TRANSFAC yes 21234723
chr17 38502984 38502989 MYC TRANSFAC yes 54208604
chr17 38503002 38503023 ZNF263 JASPAR yes 21234724
chr17 38503002 38503023 ZNF263 JASPAR yes 54208605
chr17 38503012 38503027 NR2C2 JASPAR yes 21234725
chr17 38503012 38503027 NR2C2 JASPAR yes 54208606
chr17 38503014 38503019 SP1 TRANSFAC yes 21234726
chr17 38503014 38503019 SP1 TRANSFAC yes 54208607
chr17 38503016 38503021 TFAP2A TRANSFAC yes 21234727
chr17 38503016 38503021 TFAP2A TRANSFAC yes 54208608
chr17 38503016 38503022 MZF1 JASPAR yes 21234728
chr17 38503016 38503022 MZF1 JASPAR yes 54208609
chr17 38503018 38503031 NR2F1 JASPAR yes 21234729
chr17 38503018 38503031 NR2F1 JASPAR yes 54208610
chr17 38503022 38503026 ESR1 TRANSFAC yes 21234730
chr17 38503022 38503026 ESR1 TRANSFAC yes 54208611
SNP sites on vista24712[chr17:38502716-38503032]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 38502771 rs556645107 C T
MZF1 SP1 ZNF740
4866395
chr17 38502885 rs374226607 C T
PLAG1 RREB1 ZNF740
4866396
chr17 38502894 rs528253660 G A
RREB1 SP1 ZNF740
4866397
chr17 38502899 rs540353678 C G,T
RREB1 SP1 ZNF740
4866398
chr17 38502900 rs568211216 C G
NHLH1 RREB1 ZNF740
4866399
Genes possibly regulated by vista24712[chr17:38502716-38503032]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 38443885 38459171 + CDC6 ENSG00000094804.5 38443885 0.9 0.99 15763 41169
chr17 38465444 38513094 + RARA ENSG00000131759.13 38465444 0.75 1.0 15764 62728
chr17 38516907 38520945 + CTD-2267D19.3 ENSG00000266208.1 38516907 0.82 0.99 15765 86125
chr17 38517235 38520067 - GJD3 ENSG00000183153.5 38520067 0.97 1.0 15766 82965
chr17 38544768 38574202 - TOP2A ENSG00000131747.10 38574202 0.95 0.97 15767 28830
chr17 38599702 38613983 + IGFBP4 ENSG00000141753.5 38599702 0.84 0.98 15768 3330
Expression level of Genes
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miRNAs possibly regulated by vista24712[chr17:38502716-38503032]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results